M&Dデータ科学センター

772  件  
※ 登録方法の違いにより重複して表示されている場合があります。

  1. Shun Kaneko, Yasuhiro Asahina, Miyako Murakawa, Seishin Azuma, Kento Inada, Tomohiro Mochida, Keiya Watakabe, Taro Shimizu, Jun Tsuchiya, Masato Miyoshi, Fukiko Kawai-Kitahata, Sayuri Nitta, Yasuhiro Itsui, Marie Takahashi, Tomoyuki Fujioka, Mitsuhiro Kishino, Tatsuhiko Anzai, Sei Kakinuma, Mina Nakagawa, Ryuichi Okamoto.: Analysis of prognosis and background liver disease in non-advanced hepatocellular carcinoma in two decades. Plos One. 2024.03;

  2. Takuya Takahashi, Hiroyuki Inose, Takashi Hirai, Yu Matsukura, Shingo Morishita, Satoru Egawa, Jun Hashimoto, Kunihiko Takahashi, Toshitaka Yoshii: Factors associated with the time required for CRP normalization in pyogenic spondylitis: A retrospective observational study. N Am Spine Soc J. 2024.03; 17 100301. ( PubMed , DOI )

  3. Hiroyuki Maruoka, Takaaki Hattori, Takeshi Hase, Kunihiko Takahashi, Masahiro Ohara, Satoshi Orimo, Takanori Yokota: Aberrant morphometric networks in Alzheimer's disease have hemispheric asymmetry and age dependence. Eur J Neurosci. 2024.03; 59 (6): 1332-1347. ( PubMed , DOI )

  4. Maiko Noguchi-Watanabe, Kasumi Ikuta, Miya Aishima, Kunihiko Takahashi, Tatsuhiko Anzai, Sakiko Fukui: Reply to: Effect of COVID-19 on physical function declinepredictors in nursing home residents Geriatrics & Gerontology International. 2024.03; ( DOI )

  5. Kazuki Takahashi, Miho Kobayashi, Hisae Katsumata, Shiori Tokizaki, Tatsuhiko Anzai, Yukinori Ikeda, Daniel Alcaide, Kentaro Maeda, Makoto Ishihara, Katsutoshi Tahara, Yoshiaki Kubota, Fumiko Itoh, Jihwan Park, Kunihiko Takahashi, Yukiko Matsunaga, Yasuhiro Yoshimatsu, Katarzyna Inoue, Tetsuro Watabe: CD40 is expressed in the subsets of endothelial cells undergoing partial EndoMT in tumor microenvironment Cancer Science. 2024.02;

  6. Yuki Iijima, Masaru Ejima, Takashi Yamana, Sho Shibata, Tsuyoshi Shirai, Tsukasa Okamoto, Haruhiko Furusawa, Tomoya Tateishi, Takuya Adachi, Mio Mori, Susumu Kirimura, Tatsuhiko Anzai, Kunihiko Takahashi, Yasunari Miyazaki: Assessment of Clinical Relevance of Antigen Improves Diagnostic Accuracy of Hypersensitivity Pneumonitis. BMC Pulmonary Medicine. 2024.02; 24 84.

  7. Yuki Nishida, Yosuke Yamada, Satoshi Sasaki, Eiichiro Kanda, Yoshihiko Kanno, Tatsuhiko Anzai, Kunihiko Takahashi, Keita Yamauchi, Fuminori Katsukawa: Effect of overweight/obesity and metabolic syndrome on frailty in middle-aged and older Japanese adults. Obes Sci Pract. 2024.02; 10 (1): e714. ( PubMed , DOI )

  8. Yoshito Kawasaki, Diptarama Hendrian, Ryo Yoshinaka, Ayumi Shinohara: Query Learning of Minimal Deterministic Symbolic Finite Automata Separating Regular Languages Proceedings of the 49th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2024). 2024.02; 340-354. ( DOI )

  9. Yoriyuki Konno, Keiya Uriu, Takayuki Chikata, Toru Takada, Jun-Ichi Kurita, Mahoko Takahashi Ueda, Saiful Islam, Benjy Jek Yang Tan, Jumpei Ito, Hirofumi Aso, Ryuichi Kumata, Carolyn Williamson, Shingo Iwami, Masafumi Takiguchi, Yoshifumi Nishimura, Eiji Morita, Yorifumi Satou, So Nakagawa, Yoshio Koyanagi, Kei Sato: Two-step evolution of HIV-1 budding system leading to pandemic in the human population. Cell Reports. 2024.02; 43 (2): 113697. ( PubMed , DOI )

  10. Mariko Noguchi-Watanabe, Takako Ishikawa, Kasumi Ikuta, Miya Aishima, Sayuri Nonaka, Kunihiko Takahashi, Tatsuhiko Anzai, Sakiko Fukui: Physical function decline predictors in nursing home residents using new national quality indicators Geriatrics & Gerontology International. 2024.01;

  11. Ayako Suzuki, Yukako Tani, Tatsuhiko Anzai, Aya Isumi, Satomi Doi, Takuya Ogawa, Keiji Moriyama, Takeo Fujiwara: Association between short stature at grade 1 and permanent teeth caries at grade 6 in elementary school children in Japan: a population-based cohort study International Journal of Environmental Research and Public Health.. 2024.01;

  12. Yuta Matsubara, Hiroki Kiyohara, Yohei Mikami, Kosaku Nanki, Ho Namkoong, Shotaro Chubachi, Hiromu Tanaka, Shuhei Azekawa, Shinya Sugimoto, Yusuke Yoshimatsu, Tomohisa Sujino, Kaoru Takabayashi, Naoki Hosoe, Toshiro Sato, Makoto Ishii, Naoki Hasegawa, Yukinori Okada, Ryuji Koike, Yuko Kitagawa, Akinori Kimura, Seiya Imoto, Satoru Miyano, Seishi Ogawa, Koichi Fukunaga, Takanori Kanai, : Gastrointestinal symptoms in COVID-19 and disease severity: a Japanese registry-based retrospective cohort study. J Gastroenterol. 2024.01; ( PubMed , DOI )

  13. Mitsuaki Nishikimi, Shinichiro Ohshimo, Wataru Fukumoto, Jun Hamaguchi, Kazuki Matsumura, Kenji Fujizuka, Yoshihiro Hagiwara, Ryuichi Nakayama, Naofumi Bunya, Junichi Maruyama, Toshikazu Abe, Tatsuhiko Anzai, Yoshitaka Ogata, Hiromichi Naito, Yu Amemiya, Tokuji Ikeda, Masayuki Yagi, Yutaro Furukawa, Hayato Taniguchi, Tsukasa Yagi, Ken Katsuta, Daisuke Konno, Ginga Suzuki, Yuki Kawasaki, Noriyuki Hattori, Tomoyuki Nakamura, Natsuki Kondo, Hitoshi Kikuchi, Shinichi Kai, Saaya Ichiyama, Kazuo Awai, Kunihiko Takahashi, Nobuaki Shime; J-CARVE registry group.: Chest CT findings in severe acute respiratory distress syndrome requiring V-V ECMO: J-CARVE registry. J Intensive Care. 2024.01; 12 (1): 5. ( PubMed , DOI )

  14. Maiko Noguchi-Watanabe, Takako Ishikawa, Kasumi Ikuta, Miya Aishima, Sayuri Nonaka, Kunihiko Takahashi, Tatsuhiko Anzai, Sakiko Fukui: Physical function decline predictors in nursing home residents using new national quality indicators. Geriatr Gerontol Int. 2024.01; 24 (1): 123-132. ( PubMed , DOI )

  15. Hikaru Aoki, Yasunari Miyazaki, Tatsuhiko Anzai, Kota Yokoyama, Junichi Tsuchiya, Tsuyoshi Shirai, Sho Shibata, Rie Sakakibara, Takahiro Mitsumura, Takayuki Honda, Haruhiko Furusawa, Tsukasa Okamoto, Tomoya Tateishi, Meiyo Tamaoka, Masahide Yamamoto, Kunihiko Takahashi, Ukihide Tateishi, Tetsuo Yamaguchi: Deep convolutional neural network for differentiating between sarcoidosis and lymphoma based on 18F-FDG maximum-intensity projection images. Eur Radiol. 2024.01; 34 (1): 374-383. ( PubMed , DOI )

  16. Tomomi Sakano, Tatsuhiko Anzai, Kunihiko Takahashi, Sakiko Fukui: Impact of home-visit nursing service use on costs in the last 3 months of life among older adults: A retrospective cohort study. J Nurs Scholarsh. 2024.01; ( PubMed , DOI )

  17. Fukushima T, Maetani T, Chubachi S, Tanabe N, Asakura T, Namkoong H, Tanaka H, Shimada T, Azekawa S, Otake S, Nakagawara K, Watase M, Shiraishi Y, Terai H, Sasaki M, Ueda S, Kato Y, Harada N, Suzuki S, Yoshida S, Tateno H, Yamada Y, Jinzaki M, Hirai T, Okada Y, Koike R, Ishii M, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Epicardial adipose tissue measured from analysis of adipose tissue area using chest CT imaging is the best potential predictor of COVID-19 severity. Metabolism: clinical and experimental. 2024.01; 150 155715. ( PubMed , DOI )

  18. Okawa Y, Sasagawa S, Kato H, Johnson TA, Nagaoka K, Kobayashi Y, Hayashi A, Shibayama T, Maejima K, Tanaka H, Miyano S, Shibahara J, Nishizuka S, Hirano S, Seto Y, Iwaya T, Kakimi K, Yasuda T, Nakagawa H: Immuno-genomic analysis reveals eosinophilic feature and favorable prognosis of female non-smoking esophageal squamous cell carcinomas. Cancer letters. 2024.01; 581 216499. ( PubMed , DOI )

  19. Yogi S, Shirahata T, Sato H, Nishida Y, Inoue K, Niitsu M, Akagami T, Masaki K, Nagata M, Tanaka S, Katsukawa F, Nakamura H: Non-exercise Activity Thermogenesis Correlated With Clinical Parameters in Patients With or At-Risk for Chronic Obstructive Pulmonary Disease (COPD): A Pilot Study. Cureus. 2024.01; 16 (1): e53019. ( PubMed , DOI )

  20. Atsuko Murashima, Kayoko Kaneko, Hiroshi Oguro, Yukiko Mori, Mikako Goto, Shuko Mishima, Tatsuhiko Anzai, Kunihiko Takahashi: Pregnancy-related issues from the perspective of patients with inflammatory rheumatic diseases - Results from a survey of the members of the National Association for Inflammatory Rheumatic Diseases. Mod Rheumatol. 2024; ( PubMed , DOI )

  21. Nobuhisa Morimoto, Shingo Shioji, Yuichiro Akagi, Tamami Fujiki, Shintaro Mandai, Fumiaki Ando, Takayasu Mori, Koichiro Susa, Shotaro Naito, Eisei Sohara, Tatsuhiko Anzai, Kunihiko Takahashi, Wataru Akita, Akihito Ohta, Shinichi Uchida, Soichiro Iimori.: Associations between dietary potassium intake from different food sources and hyperkalemia in patients with chronic kidney disease Journal of Renal Nutrition. 2024;

  1. Takahiro Ando, Sho Shimada, Jun Sugihara, Koji Takayama, Masayoshi Kobayashi, Yoshihiro Miyashita, Tatsuya Ito, Kaori Okayasu, Shun Tsuyuki, Takehiko Ohba, Masafumi Doi, Hiroaki Saito, Toshihide Fujie, Tomoshige Chiaki, Atsushi Nakagawa, Tatsuhiko Anzai, Kunihiko Takahashi, Sho Shibata, Tomoya Tateishi, Yasunari Miyazaki: Impairment of Social-Related Quality of Life in COVID-19 Pneumonia Survivors: A Prospective Longitudinal Study. J Clin Med. 2023.12; 12 (24): ( PubMed , DOI )

  2. Miya Aishima, Takako Ishikawa, Kasumi Ikuta, Maiko Noguchi-Watanabe, Sayuri Nonaka, Kunihiko Takahashi, Tatsuhiko Anzai, Sakiko Fukui: Unplanned Hospital Visits and Poor Oral Health With Undernutrition in Nursing Home Residents. J Am Med Dir Assoc. 2023.12; 24 (12): 1855-1860.e1. ( PubMed , DOI )

  3. Hao Ding, Hideyuki Koga, Hiroki Katagiri, Shoichi Hasegawa, Tatushiko Anzai, Mai Katakura, Aritoshi Yoshihara, Masaki Amemiya, Takashi Hoshino, Nobutake Ozeki, Tomomasa Nakamura, Yusuke Nakagawa: Low central sensitisation inventory score is associated with better post-operative outcomes of osteotomy around the knee. Knee Surg Sports Traumatol Arthrosc. 2023.12; 31 (12): 5896-5904. ( PubMed , DOI )

  4. Endo S, Okamoto T, Kawahara T, Anzai T, Takahashi K, Miyazaki Y: Effect of warm and humid days on the positivity rate of anti-Trichosporon asahii antibody test for the diagnosis of summer-type hypersensitivity pneumonitis. Respiratory investigation. 2023.12; 62 (1): 150-156. ( PubMed , DOI )

  5. Kawachi K, Tang X, Kasajima R, Yamanaka T, Shimizu E, Katayama K, Yamaguchi R, Yokoyama K, Yamaguchi K, Furukawa Y, Miyano S, Imoto S, Yoshioka E, Washimi K, Okubo Y, Sato S, Yokose T, Miyagi Y: Genetic analysis of low-grade adenosquamous carcinoma of the breast progressing to high-grade metaplastic carcinoma. Breast cancer research and treatment. 2023.12; 202 (3): 563-573. ( PubMed , DOI )

  6. Wang QS, Edahiro R, Namkoong H, Hasegawa T, Shirai Y, Sonehara K, Japan COVID-19 Task Force, Kumanogoh A, Ishii M, Koike R, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K, Okada Y: Estimating gene-level false discovery probability improves eQTL statistical fine-mapping precision. NAR genomics and bioinformatics. 2023.12; 5 (4): lqad090. ( PubMed , DOI )

  7. Kusumoto T, Chubachi S, Namkoong H, Tanaka H, Lee H, Otake S, Nakagawara K, Fukushima T, Morita A, Watase M, Asakura T, Masaki K, Kamata H, Ishii M, Hasegawa N, Harada N, Ueda T, Ueda S, Ishiguro T, Arimura K, Saito F, Yoshiyama T, Nakano Y, Mutoh Y, Suzuki Y, Edahiro R, Murakami K, Sato Y, Okada Y, Koike R, Kitagawa Y, Tokunaga K, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Characteristics of patients with COVID-19 who have deteriorating chest X-ray findings within 48 h: a retrospective cohort study. Scientific reports. 2023.12; 13 (1): 22054. ( PubMed , DOI )

  8. Kazuki Takahashi*, Miho Kobayashi*, Hisae Katsumata, Shiori Tokizaki, Tatsuhiko Anzai, Yukinori Ikeda, Daniel M. Alcaide, Kentaro Maeda, Makoto Ishihara, Katsutoshi Tahara, Yoshiaki Kubota, Fumiko Itoh, Jihwan Park, Kunihiko Takahashi, Yukiko T. Matsunaga, Yasuhiro Yoshimatsu, Katarzyna A. Podyma-Inoue, Tetsuro Watabe (*: equally contribution): CD40 is expressed in the subsets of endothelial cells undergoing partial endothelial-mesenchymal transition in tumor microenvironment. Cancer Science. 2023.11; 115 (2): 490-506. ( PubMed , DOI )

  9. Yukako Tani, Takeo Fujiwara, Tatsuhiko Anzai, Katsunori Kondo: Cooking skills, living alone, and mortality: JAGES cohort study. Int J Behav Nutr Phys Act. 2023.11; 20 (1): 131. ( PubMed , DOI )

  10. Masatoshi Takagi, Akihiro Hoshino, Kristine Bousset, Jule Röddecke, Hanna Luisa Martin, Iulia Folcut, Dan Tomomasa, Xi Yang, Junya Kobayashi, Naoki Sakata, Kenichi Yoshida, Satoru Miyano, Seishi Ogawa, Seiji Kojima, Tomohiro Morio, Thilo Dörk, Hirokazu Kanegane: Bone Marrow Failure and Immunodeficiency Associated with Human RAD50 Variants. J Clin Immunol. 2023.11; 43 (8): 2136-2145. ( PubMed , DOI )

  11. Sakurai K, Chubachi S, Asakura T, Namkoong H, Tanaka H, Azekawa S, Shimada T, Otake S, Nakagawara K, Fukushima T, Lee H, Watase M, Kusumoto T, Masaki K, Kamata H, Ishii M, Hasegawa N, Okada Y, Koike R, Kitagawa Y, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Prognostic significance of hypertension history and blood pressure on admission in Japanese patients with coronavirus disease 2019: integrative analysis from the Japan COVID-19 Task Force. Hypertension research : official journal of the Japanese Society of Hypertension. 2023.11; ( PubMed , DOI )

  12. Murakami K, Shinozaki N, Kimoto N, Onodera H, Oono F, McCaffrey TA, Livingstone MBE, Okuhara T, Matsumoto M, Katagiri R, Ota E, Chiba T, Nishida Y, Sasaki S: Web-Based Content on Diet and Nutrition Written in Japanese: Infodemiology Study Based on Google Trends and Google Search. JMIR formative research. 2023.11; 7 e47101. ( PubMed , DOI )

  13. Tanaka H, Maetani T, Chubachi S, Tanabe N, Shiraishi Y, Asakura T, Namkoong H, Shimada T, Azekawa S, Otake S, Nakagawara K, Fukushima T, Watase M, Terai H, Sasaki M, Ueda S, Kato Y, Harada N, Suzuki S, Yoshida S, Tateno H, Yamada Y, Jinzaki M, Hirai T, Okada Y, Koike R, Ishii M, Hasegawa N, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Clinical utilization of artificial intelligence-based COVID-19 pneumonia quantification using chest computed tomography - a multicenter retrospective cohort study in Japan. Respiratory research. 2023.10; 24 (1): 241. ( PubMed , DOI )

  14. Hirofumi Aso, Jumpei Ito, Haruka Ozaki, Yukie Kashima, Yutaka Suzuki, Yoshio Koyanagi, Kei Sato: Single-cell transcriptome analysis illuminating the characteristics of species-specific innate immune responses against viral infections. GigaScience. 2023.10; 12 giad086. ( PubMed , DOI )

  15. Yosuke Nakatani, Masateru Takigawa, F Daniel Ramirez, Takashi Nakashima, Clémentine André, Cyril Goujeau, Aline Carapezzi, Tatsuhiko Anzai, Philipp Krisai, Takamitsu Takagi, Tsukasa Kamakura, Vlachos Konstantinos, Ghassen Cheniti, Romain Tixier, Nicolas Welte, Remi Chauvel, Josselin Duchateau, Thomas Pambrun, Nicolas Derval, Frédéric Sacher, Meleze Hocini, Michel Haïssaguerre, Pierre Jaïs: Electrophysiologic Determinants of Isoelectric Intervals on Surface Electrocardiograms During Atrial Tachycardia: Insights From High-Density Mapping. JACC Clin Electrophysiol. 2023.10; 9 (10): 2054-2066. ( PubMed , DOI )

  16. Mitsuaki Nishikimi, Shinichiro Ohshimo, Jun Hamaguchi, Kenji Fujizuka, Yoshihiro Hagiwara, Tatsuhiko Anzai, Junki Ishii, Yoshitaka Ogata, Toshiyuki Aokage, Tokuji Ikeda, Tsukasa Yagi, Ginga Suzuki, Ken Ishikura, Ken Katsuta, Daisuke Konno, Noriyuki Hattori, Tomoyuki Nakamura, Yosuke Matsumura, Daisuke Kasugai, Hitoshi Kikuchi, Tatsuhiko Iino, Shinichi Kai, Haruka Hashimoto, Takeshi Yoshida, Yumi Igarashi, Takayuki Ogura, Kazuki Matsumura, Keiki Shimizu, Mitsunobu Nakamura, Shingo Ichiba, Kunihiko Takahashi, Nobuaki Shime: High versus low positive end-expiratory pressure setting in patients receiving veno-venous extracorporeal membrane oxygenation support for severe acute respiratory distress syndrome: study protocol for the multicentre, randomised ExPress SAVER Trial. BMJ Open. 2023.10; 13 (10): e072680. ( PubMed , DOI )

  17. Haruki Ideguchi, Diptarama Hendrian, Ryo Yoshinaka, Ayumi Shinohara: Efficient Parameterized Pattern Matching in Sublinear Space Proceedings of the 30th International Symposium on String Processing and Information Retrieval (SPIRE 2023). 2023.09; 271-283. ( DOI )

  18. Kouta Okabe, Takuya Mieno, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai: Linear-Time Computation of Generalized Minimal Absent Words for Multiple Strings Proc. 30th International Symposium on String Processing and Information Retrieval (SPIRE 2023). 2023.09; 14240 331-344. ( DOI )

  19. Hideo Bannai, Jonas Eller: Lyndon Arrays in Sublinear Time Proc. 31st Annual European Symposium on Algorithms (ESA 2023). 2023.09; 274 14:1-14:16. ( DOI )

  20. Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie: Acceleration of FM-Index Queries Through Prefix-Free Parsing Proc. 23rd International Workshop on Algorithms in Bioinformatics (WABI 2023). 2023.09; 273 13:1-13:16. ( DOI )

  21. Funasaki S, Hatano A, Nakatsumi H, Koga D, Sugahara O, Yumimoto K, Baba M, Matsumoto M, Nakayama KI: A stepwise and digital pattern of RSK phosphorylation determines the outcome of thymic selection. iScience. 2023.09; 26 (9): 107552. ( PubMed , DOI )

  22. Tanaka Y, Yamagishi M, Motomura Y, Kamatani T, Oguchi Y, Suzuki N, Kiniwa T, Kabata H, Irie M, Tsunoda T, Miya F, Goda K, Ohara O, Funatsu T, Fukunaga K, Moro K, Uemura S, Shirasaki Y: Time-dependent cell-state selection identifies transiently expressed genes regulating ILC2 activation. Communications biology. 2023.09; 6 (1): 915. ( PubMed , DOI )

  23. Kayo Hirooka, Hiroki Fukahori, Ayako Ninomiya, Sakiko Fukui, Kunihiko Takahashi, Tatsuhiko Anzai, Tomoaki Ishibashi: Impact of family involvement and an advance directive to not hospitalize on hospital transfers of residents in long-term care facilities. Arch Gerontol Geriatr. 2023.09; 117 105183. ( PubMed , DOI )

  24. Yuki Nishida, Tatsuhiko Anzai, Kunihiko Takahashi, Takahide Kozuma, Eiichiro Kanda, Keita Yamauchi, Fuminori Katsukawa: Multimorbidity patterns in the working age population with the top 10% medical cost from exhaustive insurance claims data of Japan Health Insurance Association. PLoS One. 2023.09; 18 (9): e0291554. ( PubMed , DOI )

  25. COVID-19 Host Genetics Initiative: A second update on mapping the human genetic architecture of COVID-19. Nature. 2023.09; 621 (7977): E7-E26. ( PubMed , DOI )

  26. Hiroyuki Inose, Takuya Takahashi, Yu Matsukura, Jun Hashimoto, Kurando Utagawa, Satoru Egawa, Kentaro Yamada, Takashi Hirai, Kunihiko Takahashi, Toshitaka Yoshii: Effect of vitamin D deficiency on surgical outcomes of degenerative cervical myelopathy. N Am Spine Soc J. 2023.09; 15 100239. ( PubMed , DOI )

  27. Yuta Fujishige, Yuki Tsujimaru, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Linear-time computation of DAWGs, symmetric indexing structures, and MAWs for integer alphabets Theoretical Computer Science. 2023.09; 973 114093. ( DOI )

  28. Kodama M, Toyokawa G, (20名省略), Bamba T, Shimizu H, Yoshizumi T, Nakayama KI: Modulation of host glutamine anabolism enhances the sensitivity of small cell lung cancer to chemotherapy Cell Reports. 2023.08; 42 (8): 112899.

  29. 1. Tanaka Y, Yamagishi M, Motomura Y, Kamatani T, Oguchi Y, Suzuki N, Kiniwa T, Kabata H, Tsunoda T, Miya F, Goda K, Ohara O, Funatsu T, Fukunaga K, Moro K, Uemura U and Shirasaki Y.: Time-Dependent Cell-State Selection identifies transiently expressed genes regulating ILC2 activation Communication Biology. 2023.08;

  30. Bannai Hideo, Tomohiro I, Koeppl Dominik: Longest bordered and periodic subsequences INFORMATION PROCESSING LETTERS. 2023.08; 182 ( DOI )

  31. Tsubasa Ito, Takahiro Otani, Tatsuhiko Anzai, Takashi Okumura, Kunihiko Takahashi: Potential Biases of the Transmission Risks of COVID-19 estimated by Contact Tracing Surveys in Japan. Epidemiology, Biostatistics, and Public Health. 2023.08; ( DOI )

  32. Nishimura T, Kakiuchi N, Yoshida K, Sakurai T, Kataoka TR, Kondoh E, Chigusa Y, Kawai M, Sawada M, Inoue T, Takeuchi Y, Maeda H, Baba S, Shiozawa Y, Saiki R, Nakagawa MM, Nannya Y, Ochi Y, Hirano T, Nakagawa T, Inagaki-Kawata Y, Aoki K, Hirata M, Nanki K, Matano M, Saito M, Suzuki E, Takada M, Kawashima M, Kawaguchi K, Chiba K, Shiraishi Y, Takita J, Miyano S, Mandai M, Sato T, Takeuchi K, Haga H, Toi M, Ogawa S: Evolutionary histories of breast cancer and related clones. Nature. 2023.08; 620 (7974): 607-614. ( PubMed , DOI )

  33. Suzuki M, Kasajima R, Yokose T, Shimizu E, Hatakeyama S, Yamaguchi K, Yokoyama K, Katayama K, Yamaguchi R, Furukawa Y, Miyano S, Imoto S, Shinozaki-Ushiku A, Ushiku T, Miyagi Y: KMT2C expression and DNA homologous recombination repair factors in lung cancers with a high-grade fetal adenocarcinoma component. Translational lung cancer research. 2023.08; 12 (8): 1738-1751. ( PubMed , DOI )

  34. Kobayashi Y, Niida A, Nagayama S, Saeki K, Haeno H, Takahashi KK, Hayashi S, Ozato Y, Saito H, Hasegawa T, Nakamura H, Tobo T, Kitagawa A, Sato K, Shimizu D, Hirata H, Hisamatsu Y, Toshima T, Yonemura Y, Masuda T, Mizuno S, Kawazu M, Kohsaka S, Ueno T, Mano H, Ishihara S, Uemura M, Mori M, Doki Y, Eguchi H, Oshima M, Suzuki Y, Shibata T, Mimori K: Subclonal accumulation of immune escape mechanisms in microsatellite instability-high colorectal cancers. British journal of cancer. 2023.08; 129 (7): 1105-1118. ( PubMed , DOI )

  35. Yutaro Numaya, Diptarama Hendrian, Ryo Yoshinaka, Ayumi Shinohara: Identification of Substitutable Context-Free Languages over Infinite Alphabets from Positive Data Proceedings of the 16th International Conference on Grammatical Inference (ICGI 2023). 2023.07; 23-34.

  36. Tanaka H, Chubachi S, Asakura T, Namkoong H, Azekawa S, Otake S, Nakagawara K, Fukushima T, Lee H, Watase M, Sakurai K, Kusumoto T, Masaki K, Kamata H, Ishii M, Hasegawa N, Okada Y, Koike R, Kitagawa Y, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Characteristics and clinical effectiveness of COVID-19 vaccination in hospitalized patients in Omicron-dominated epidemic wave - a nationwide study in Japan. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases. 2023.07; 132 84-88. ( PubMed , DOI )

  37. Hara Y, Shiba N, Yoshida K, Yamato G, Kaburagi T, Shiraishi Y, Ohki K, Shiozawa Y, Kawamura M, Kawasaki H, Sotomatsu M, Takizawa T, Matsuo H, Shimada A, Kiyokawa N, Tomizawa D, Taga T, Ito E, Horibe K, Miyano S, Adachi S, Taki T, Ogawa S, Hayashi Y: TP53 and RB1 alterations characterize poor prognostic subgroups in pediatric acute myeloid leukemia. Genes, chromosomes & cancer. 2023.07; 62 (7): 412-422. ( PubMed , DOI )

  38. Tanaka H, Chubachi S, Namkoong H, Sato Y, Asakura T, Lee H, Azekawa S, Otake S, Nakagawara K, Fukushima T, Watase M, Sakurai K, Kusumoto T, Kondo Y, Masaki K, Kamata H, Ishii M, Kaneko Y, Hasegawa N, Ueda S, Sasaki M, Izumo T, Inomata M, Miyazawa N, Kimura Y, Suzuki Y, Harada N, Ichikawa M, Takata T, Ishikura H, Yoshiyama T, Kokuto H, Murakami K, Sano H, Ueda T, Kuwahara N, Fujiwara A, Ogura T, Inoue T, Asami T, Mutoh Y, Nakachi I, Baba R, Nishi K, Tani M, Kagyo J, Hashiguchi M, Oguma T, Asano K, Nishikawa M, Watanabe H, Okada Y, Koike R, Kitagawa Y, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K: Propensity-Score Matched Analysis of the Effectiveness of Baricitinib in Patients With Coronavirus Disease 2019 (COVID-19) Using Nationwide Real-World Data: An Observational Matched Cohort Study From the Japan COVID-19 Task Force. Open forum infectious diseases. 2023.07; 10 (7): ofad311. ( PubMed , DOI )

  39. Ozawa T, Asakura T, Chubachi S, Namkoong H, Tanaka H, Lee K, Fukushima T, Otake S, Nakagawara K, Watase M, Masaki K, Kamata H, Ishii M, Hasegawa N, Harada N, Ueda T, Ueda S, Ishiguro T, Arimura K, Saito F, Yoshiyama T, Nakano Y, Mutoh Y, Suzuki Y, Edahiro R, Murakami K, Okada Y, Koike R, Kitagawa Y, Tokunaga K, Kimura A, Imoto S, Miyano S, Ogawa S, Kanai T, Fukunaga K, Japan COVID-19 Task Force: Use of the neutrophil-to-lymphocyte ratio and an oxygen requirement to predict disease severity in patients with COVID-19. Respiratory investigation. 2023.07; 61 (4): 454-459. ( PubMed , DOI )

  40. Hiroyuki Inose, Tsuyoshi Kato, Yu Matsukura, Takashi Hirai, Toshitaka Yoshii, Shigenori Kawabata, Kunihiko Takahashi, Atsushi Okawa: Factors influencing the long-term outcomes of instrumentation surgery for degenerative lumbar spondylolisthesis: a post-hoc analysis of a prospective randomized study. Spine J. 2023.06; 23 (6): 799-804. ( PubMed , DOI )

  41. Toshiki Sera, Norio Otani, Hideo Bannai, Takanori Hasegawa, Takehiro Umemura, Hideki Honda, Akio Kimura: The current status of emergency departments in secondary emergency medical institutions in Japan: a questionnaire survey. International Journal of Emergency Medicine. 2023.06; 16 (1): 40. ( PubMed , DOI )

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  43. Saeka Takabayashi, Emiko Okada, Takumi Hirata, Hidemi Takimoto, Mieko Nakamura, Satoshi Sasaki, Kunihiko Takahashi, Koshi Nakamura, Shigekazu Ukawa, Akiko Tamakoshi: Nutritional Adequacy Assessment of the Japanese Diet Using the Number of Dishes Compared to Existing Dietary Diversity Indices: A Cross-Sectional Analysis from the 2012 National Health and Nutrition Survey, Japan. J Nutr Sci Vitaminol (Tokyo). 2023.06; 69 (3): 197-205. ( PubMed , DOI )

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  105. Nobuyuki Kakiuchi, Kenichi Yoshida, Motoi Uchino, Takako Kihara, Kotaro Akaki, Yoshikage Inoue, Kenji Kawada, Satoshi Nagayama, Akira Yokoyama, Shuji Yamamoto, Minoru Matsuura, Takahiro Horimatsu, Tomonori Hirano, Norihiro Goto, Yasuhide Takeuchi, Yotaro Ochi, Yusuke Shiozawa, Yasunori Kogure, Yosaku Watatani, Yoichi Fujii, Soo Ki Kim, Ayana Kon, Keisuke Kataoka, Tetsuichi Yoshizato, Masahiro M Nakagawa, Akinori Yoda, Yasuhito Nanya, Hideki Makishima, Yuichi Shiraishi, Kenichi Chiba, Hiroko Tanaka, Masashi Sanada, Eiji Sugihara, Taka-Aki Sato, Takashi Maruyama, Hiroyuki Miyoshi, Makoto Mark Taketo, Jun Oishi, Ryosaku Inagaki, Yutaka Ueda, Shinya Okamoto, Hideaki Okajima, Yoshiharu Sakai, Takaki Sakurai, Hironori Haga, Seiichi Hirota, Hiroki Ikeuchi, Hiroshi Nakase, Hiroyuki Marusawa, Tsutomu Chiba, Osamu Takeuchi, Satoru Miyano, Hiroshi Seno, Seishi Ogawa: Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis. Nature. 2020.01; 577 (7789): 260-265. ( PubMed , DOI )

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  113. Takuya Mieno, Yuki Kuhara, Tooru Akagi, Yuta Fujishige, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Minimal Unique Substrings and Minimal Absent Words in a Sliding Window SOFSEM 2020: Theory and Practice of Computer Science. 2020; 148-160. ( DOI )

  114. Yuki Nishida, Shigeho Tanaka, Satoshi Nakae, Yosuke Yamada, Katsutaro Morino, Keiko Kondo, Kaori Nishida, Akiko Ohi, Mika Kurihara, Masaya Sasaki, Satoshi Ugi, Hiroshi Maegawa, Naoyuki Ebine, Satoshi Sasaki, Fuminori Katsukawa: Validity of the Use of a Triaxial Accelerometer and a Physical Activity Questionnaire for Estimating Total Energy Expenditure and Physical Activity Level among Elderly Patients with Type 2 Diabetes Mellitus: CLEVER-DM Study. Ann Nutr Metab. 2020; 76 (1): 62-72. ( PubMed , DOI )

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  5. Alphlard-nt: Bayesian method for human leukocyte antigen genotyping and mutation calling through simultaneous analysis of normal and tumor whole-genome sequence data 2019.09; 26 (9): 923-937. ( PubMed , DOI )

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  17. Yoshiaki Minakata, Takashi Motegi, Jun Ueki, Yasuhiro Gon, Shuhei Nakamura, Tatsuhiko Anzai, Kazuto Hirata, Masakazu Ichinose: Effect of tiotropium/olodaterol on sedentary and active time in patients with COPD: post hoc analysis of the VESUTO study Int J Chron Obstruct Pulmon Dis. 2019; 14 1789-1801. ( PubMed , DOI )

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  19. Hideo Bannai, Juha Kärkkäinen, Dominik Köppl, Marcin Piatkowski: Indexing the Bijective BWT. 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019, June 18-20, 2019, Pisa, Italy.. 2019; 17:1-17:14. ( DOI )

  20. Ryo Sugahara, Yuto Nakashima, Shunsuke Inenaga,Array, Masayuki Takeda: Computing Runs on a Trie. 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019, June 18-20, 2019, Pisa, Italy.. 2019; 23:1-23:11. ( DOI )

  21. Noriki Fujisato, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: The Parameterized Position Heap of a Trie. Algorithms and Complexity - 11th International Conference, CIAC 2019, Rome, Italy, May 27-29, 2019, Proceedings. 2019; 237-248. ( DOI )

  22. Yuki Urabe, Yuto Nakashima, Shunsuke Inenaga,Array, Masayuki Takeda: On the Size of Overlapping Lempel-Ziv and Lyndon Factorizations. 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019, June 18-20, 2019, Pisa, Italy.. 2019; 29:1-29:11. ( DOI )

  23. Isamu Furuya, Takuya Takagi, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Takuya Kida: MR-RePair: Grammar Compression Based on Maximal Repeats. Data Compression Conference, DCC 2019, Snowbird, UT, USA, March 26-29, 2019. 2019; 508-517. ( DOI )

  24. Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga,Array, Masayuki Takeda: Faster Queries for Longest Substring Palindrome After Block Edit. 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019, June 18-20, 2019, Pisa, Italy.. 2019; 27:1-27:13. ( DOI )

  25. Golnaz Badkobeh, Hideo Bannai, Maxime Crochemore, Tomohiro I, Shunsuke Inenaga, Shiho Sugimoto: k-Abelian Pattern Matching: Revisited, Corrected, and Extended. Prague Stringology Conference 2019, Prague, Czech Republic, August 26-28, 2019.. 2019; 29-40.

  26. Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Maximal Palindromes and Distinct Palindromes in a Trie. Prague Stringology Conference 2019, Prague, Czech Republic, August 26-28, 2019.. 2019; 3-15.

  27. Kiichi Watanabe, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Shortest Unique Palindromic Substring Queries on Run-Length Encoded Strings. Combinatorial Algorithms - 30th International Workshop, IWOCA 2019, Pisa, Italy, July 23-25, 2019, Proceedings. 2019; 430-441. ( DOI )

  28. Jarno Alanko, Hideo Bannai, Bastien Cazaux, Pierre Peterlongo, Jens Stoye: Finding All Maximal Perfect Haplotype Blocks in Linear Time. 19th International Workshop on Algorithms in Bioinformatics, WABI 2019, September 8-10, 2019, Niagara Falls, NY, USA.. 2019; 8:1-8:9. ( DOI )

  29. Takahiro Otani, Kunihiko Takahashi, Ayano Takeuchi, Mari Asami: Comparison of Spatial Interpolation Methods based on Exposure Assessments of Air Pollutants: A Case Study on Nuclear Substances in Fukushima. Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies. 2019; 5 415-421. ( DOI )

  30. Takuya Mieno, Dominik Köppl, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Compact Data Structures for Shortest Unique Substring Queries String Processing and Information Retrieval. 2019; 107-123. ( DOI )

  31. Noriki Fujisato, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Direct Linear Time Construction of Parameterized Suffix and LCP Arrays for Constant Alphabets String Processing and Information Retrieval. 2019; 382-391. ( DOI )

  32. Yuta Fujishige, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: An Improved Data Structure for Left-Right Maximal Generic Words Problem 30th International Symposium on Algorithms and Computation (ISAAC 2019). 2019; 40:1-40:12. ( DOI )

  33. Kazuki Kai, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda, Tomasz Kociumaka: On Longest Common Property Preserved Substring Queries String Processing and Information Retrieval. 2019; 162-174. ( DOI )

  34. Yuki Nishida, Satoshi Nakae, Yosuke Yamada, Emi Kondo, Miwa Yamaguchi, Hiroyuki Shirato, Hirohiko Hirano, Satoshi Sasaki, Shigeho Tanaka, Fuminori Katsukawa: Validity of One-Day Physical Activity Recall for Estimating Total Energy Expenditure in Elderly Residents at Long-Term Care Facilities: CLinical EValuation of Energy Requirements Study (CLEVER Study). J Nutr Sci Vitaminol (Tokyo). 2019; 65 (2): 148-156. ( PubMed , DOI )

  35. Katsutaro Morino, Keiko Kondo, Shigeho Tanaka, Yuki Nishida, Satoshi Nakae, Yosuke Yamada, Satoshi Ugi, Keiko Fuse, Itsuko Miyazawa, Akiko Ohi, Kaori Nishida, Mika Kurihara, Masaya Sasaki, Naoyuki Ebine, Satoshi Sasaki, Fuminori Katsukawa, Hiroshi Maegawa: Total energy expenditure is comparable between patients with and without diabetes mellitus: Clinical Evaluation of Energy Requirements in Patients with Diabetes Mellitus (CLEVER-DM) Study. BMJ Open Diabetes Res Care. 2019; 7 (1): e000648. ( PubMed , DOI )

  36. Keibun Liu, Takayuki Ogura, Kunihiko Takahashi, Mitsunobu Nakamura, Hiroaki Ohtake, Kenji Fujiduka, Emi Abe, Hitoshi Oosaki, Dai Miyazaki, Hiroyuki Suzuki, Mitsuaki Nishikimi, Mamoru Komatsu, Alan Kawarai Lefor, Takashi Mato: A Progressive Early Mobilization Program Is Significantly Associated With Clinical and Economic Improvement: A Single-Center Quality Comparison Study. Crit. Care Med.. 2019; 47 (9): e744-e752. ( PubMed , DOI )

  37. T Fujii, Y Shibata, A Akane, W Aoki, A Sekiguchi, K Takahashi, S Matsui, K Nishiwaki: A randomised controlled trial of pectoral nerve-2 (PECS 2) block vs. serratus plane block for chronic pain after mastectomy. Anaesthesia. 2019; 74 (12): 1558-1562. ( PubMed , DOI )

  38. Takashi Yamauchi, Takeshi Sasaki, Kunihiko Takahashi, Shigeo Umezaki, Masaya Takahashi, Toru Yoshikawa, Machi Suka, Hiroyuki Yanagisawa: Long working hours, sleep-related problems, and near-misses/injuries in industrial settings using a nationally representative sample of workers in Japan. PLoS ONE. 2019; 14 (7): e0219657. ( PubMed , DOI )

  39. Shiori Komori, Shinji Ueno, Yasuki Ito, Akira Sayo, Monika Meinert, Taro Kominami, Daiki Inooka, Masahiro Kitagawa, Kazuki Nishida, Kunihiko Takahashi, Shigeyuki Matsui, Hiroko Terasaki: Steeper Macular Curvature in Eyes With Non-Highly Myopic Retinitis Pigmentosa. Invest. Ophthalmol. Vis. Sci.. 2019; 60 (8): 3135-3141. ( PubMed , DOI )

  40. Hiroki Nakajima, Mitsuaki Nishikimi, Miho Shimizu, Kazuhiro Hayashi, Takayuki Inoue, Kazuki Nishida, Kunihiko Takahashi, Shigeyuki Matsui, Yoshihiro Nishida, Naoyuki Matsuda: Clinical Frailty Scale Score Before ICU Admission Is Associated With Mobility Disability in Septic Patients Receiving Early Rehabilitation. Crit Care Explor. 2019; 1 (12): e0066. ( PubMed , DOI )

  41. Emiko Okada, Kunihiko Takahashi, Koshi Nakamura, Shigekazu Ukawa, Saeka Takabayashi, Mieko Nakamura, Satoshi Sasaki, Akiko Tamakoshi, Hidemi Takimoto: Dietary patterns and abnormal glucose tolerance among Japanese: findings from the National Health and Nutrition Survey, 2012. Public Health Nutr. 2019; 22 (13): 2460-2468. ( PubMed , DOI )

  42. Masato Yoshihara, Hiroaki Kajiyama, Satoshi Tamauchi, Shiro Suzuki, Kunihiko Takahashi, Shigeyuki Matsui, Fumitaka Kikkawa: Prognostic factors and effects of fertility-sparing surgery in women of reproductive age with ovarian clear-cell carcinoma: a propensity score analysis. J Gynecol Oncol. 2019; 30 (6): e102. ( PubMed , DOI )

  43. Atsushi Niida, Takanori Hasegawa, Satoru Miyano: Sensitivity analysis of agent-based simulation utilizing massively parallel computation and interactive data visualization. PLoS One. 2019; 14 (3): e0210678. ( PubMed , DOI )

  44. Kengo Nomura, Takeshi Y Hiyama, Hiraki Sakuta, Takashi Matsuda, Chia-Hao Lin, Kenta Kobayashi, Kazuto Kobayashi, Tomoyuki Kuwaki, Kunihiko Takahashi, Shigeyuki Matsui, Masaharu Noda: [Na+] increases in body fluids sensed by central Nax induce sympathetically mediated blood pressure elevations via H+-dependent activation of ASIC1a. Neuron. 2019; 101 (1): 60-75.e6. ( PubMed , DOI )

  45. Tatsuhiko Anzai, Kunihiko Takahashi, Michiko Watanabe: Adverse reaction reports of neuroleptic malignant syndrome induced by atypical antipsychotic agents in the Japanese Adverse Drug Event Report (JADER) database. Psychiatry Clin. Neurosci.. 2019; 73 (1): 27-33. ( PubMed , DOI )

  46. Mitsuaki Nishikimi, Takayuki Ogura, Kazuki Nishida, Kunihiko Takahashi, Mitsunobu Nakamura, Shigeyuki Matsui, Naoyuki Matsuda, Taku Iwami: External validation of a risk classification at the emergency department of post-cardiac arrest syndrome patients undergoing targeted temperature management. Resuscitation. 2019; 140 135-141. ( PubMed , DOI )

  47. Takanori Kawabata, Ryo Emoto, Jo Nishino, Kunihiko Takahashi, Shigeyuki Matsui: Two-stage analysis for selecting fixed numbers of features in omics association studies. Stat Med. 2019; 38 (16): 2956-2971. ( PubMed , DOI )

  48. Daisuke Kasugai, Mitsuaki Nishikimi, Kazuki Nishida, Michiko Higashi, Takanori Yamamoto, Atsushi Numaguchi, Kunihiko Takahashi, Shigeyuki Matsui, Naoyuki Matsuda: Timing of administration of epinephrine predicts the responsiveness to epinephrine in norepinephrine-refractory septic shock: a retrospective study. J Intensive Care. 2019; 7 20. ( PubMed , DOI )

  49. Yoshihiro Nishida, Akira Kawai, Junya Toguchida, Akira Ogose, Keisuke Ae, Toshiyuki Kunisada, Yoshihiro Matsumoto, Tomoya Matsunobu, Kunihiko Takahashi, Kazuki Nishida, Toshifumi Ozaki: Clinical features and treatment outcome of desmoid-type fibromatosis: based on a bone and soft tissue tumor registry in Japan. Int J Clin Oncol. 2019; 24 (11): 1498-1505. ( PubMed , DOI )

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  2. Masashi Fujita, Seiya Imoto, Rui Yamaguchi, Takanori Hasegawa, Shuto Hayashi, Kazuhiro Kakimi, Satoru Miyano, Hiroki Yamaue, Kazuaki Chayama, Hidewaki Nakagawa: Genomic insights into immune suppression in liver cancer CANCER SCIENCE. 2018.12; 109 640.

  3. ALPHLARD: A Bayesian method for analyzing HLA genes from whole genome sequence data 2018.11; 19 (1): 790. ( PubMed , DOI )

  4. Shintaro Narisada, Diptarama Hendrian, Ryo Yoshinaka, Ayumi Shinohara: Linear-Time Online Algorithm Inferring the Shortest Path from a Walk String Processing and Information Retrieval - 25th International Symposium, SPIRE 2018. 2018.10; 311-324. ( DOI )

  5. Yuta Fujishige, Takuya Takagi, Diptarama Hendrian: Truncated DAWGs and Their Application to Minimal Absent Word Problem. String Processing and Information Retrieval - 25th International Symposium, SPIRE 2018. 2018.10; 139-152. ( DOI )

  6. Yuki Nozaki, Diptarama Hendrian, Ryo Yoshinaka, Ayumi Shinohara: Enumeration of Cryptarithms Using Deterministic Finite Automata Implementation and Application of Automata. 2018.07; 286-298. ( DOI )

  7. Sakurai Kaori, Chubachi Shotaro, Irie Hidehiro, Tsutsumi Akihiro, Kameyama Naofumi, Kamatani Takashi, Koh Hidefumi, Terashima Takeshi, Nakamura Hidetoshi, Asano Koichiro, Betsuyaku Tomoko: Clinical utility of blood neutrophil-lymphocyte ratio in Japanese COPD patients BMC PULMONARY MEDICINE. 2018.05; 18 (1): 65. ( PubMed , DOI )

  8. Konno Y, Nagaoka S, Kimura I, Yamamoto K, Kagawa Y, Kumata R, Aso H, Ueda MT, Nakagawa S, Kobayashi T, Koyanagi Y, Sato K: New World feline APOBEC3 potently controls inter-genus lentiviral transmission. Retrovirology. 2018.04; 15 (1): 31. ( PubMed , DOI )

  9. Masashi Fujita, Seiya Imoto, Rui Yamaguchi, Takanori Hasegawa, Shuto Hayashi, Satoru Miyano, Hiroki Yamaue, Kazuaki Chayama, Hidewaki Nakagawa: Immuno-genomic subtype of liver cancer correlates with mechanisms of immune suppression and prognosis HUMAN GENOMICS. 2018.03; 12

  10. Kei Sato, Naoko Misawa, Junko S Takeuchi, Tomoko Kobayashi, Taisuke Izumi, Hirofumi Aso, Shumpei Nagaoka, Keisuke Yamamoto, Izumi Kimura, Yoriyuki Konno, Yusuke Nakano, Yoshio Koyanagi: Experimental adaptive evolution of simian immunodeficiency virus SIVcpz to pandemic human immunodeficiency virus type 1 by using a humanized mouse model Journal of Virology. 2018.02; 92 (4): e01905-17. ( PubMed , DOI )

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  13. Duel and sweep algorithm for order-preserving pattern matching 2018; 10706 624-635. ( DOI )

  14. Masakazu Ichinose, Yoshiaki Minakata, Takashi Motegi, Jun Ueki, Yasuhiro Gon, Tetsuo Seki, Tatsuhiko Anzai, Shuhei Nakamura, Kazuto Hirata: Efficacy of tiotropium/olodaterol on lung volume, exercise capacity, and physical activity. Int J Chron Obstruct Pulmon Dis. 2018; 13 1407-1419. ( PubMed , DOI )

  15. Yoshiya Tanaka, Hideto Kameda, Kazuyoshi Saito, Yuko Kaneko, Eiichi Tanaka, Shinsuke Yasuda, Naoto Tamura, Keishi Fujio, Takao Fujii, Toshihisa Kojima, Tatsuhiko Anzai, Chikuma Hamada, Yoshihisa Fujino, Shinya Matsuda, Hitoshi Kohsaka: Effect of subcutaneous tocilizumab treatment on work/housework status in biologic-naïve rheumatoid arthritis patients using inverse probability of treatment weighting: FIRST ACT-SC study. Arthritis Res. Ther.. 2018; 20 (1): 151. ( PubMed , DOI )

  16. Mitsuaki Nishikimi, Atsushi Numaguchi, Kunihiko Takahashi, Shigeyuki Matsui, Naoyuki Matsuda: The authors reply. Crit Care Med. 2018; 46 (10): e1010-e1011. ( PubMed , DOI )

  17. Noriki Fujisato, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Right-to-left Online Construction of Parameterized Position Heaps. Prague Stringology Conference 2018, Prague, Czech Republic, August 27-28, 2018.. 2018; 91-102.

  18. Yuki Kuhara, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Recovering, Counting and Enumerating Strings from Forward and Backward Suffix Arrays. String Processing and Information Retrieval - 25th International Symposium, SPIRE 2018, Lima, Peru, October 9-11, 2018, Proceedings. 2018; 254-267. ( DOI )

  19. Akihiro Nishi, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: O(n log n)-time Text Compression by LZ-style Longest First Substitution. Prague Stringology Conference 2018, Prague, Czech Republic, August 27-28, 2018.. 2018; 12-26.

  20. Isamu Furuya, Yuto Nakashima, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Lyndon Factorization of Grammar Compressed Texts Revisited. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 24:1-24:10. ( DOI )

  21. Keisuke Goto, Tomohiro I, Hideo Bannai, Shunsuke Inenaga: Block Palindromes: A New Generalization of Palindromes. String Processing and Information Retrieval - 25th International Symposium, SPIRE 2018, Lima, Peru, October 9-11, 2018, Proceedings. 2018; 183-190. ( DOI )

  22. Hideo Bannai, Travis Gagie, Tomohiro I: Online LZ77 Parsing and Matching Statistics with RLBWTs. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 7:1-7:12. ( DOI )

  23. Kotaro Aoyama, Yuto Nakashima, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Faster Online Elastic Degenerate String Matching. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 9:1-9:10. ( DOI )

  24. Hiroe Inoue, Yuto Nakashima, Takuya Mieno, Shunsuke Inenaga,Array, Masayuki Takeda: Algorithms and combinatorial properties on shortest unique palindromic substrings. J. Discrete Algorithms. 2018; 52-53 122-132. ( DOI )

  25. Rui Henriques, Alexandre P. Francisco, Luís M, S. Russo, Hideo Bannai: Order-Preserving Pattern Matching Indeterminate Strings. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 2:1-2:15. ( DOI )

  26. Hideo Bannai, Travis Gagie, Shunsuke Inenaga, Juha Kärkkäinen, Dominik Kempa, Marcin Piatkowski, Shiho Sugimoto: Diverse Palindromic Factorization is NP-Complete. Int. J. Found. Comput. Sci.. 2018; 29 (2): 143-164. ( DOI )

  27. Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Longest substring palindrome after edit. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 12:1-12:14. ( DOI )

  28. Takafumi Inoue, Shunsuke Inenaga, Heikki Hyyrö, Hideo Bannai, Masayuki Takeda: Computing longest common square subsequences. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 15:1-15:13. ( DOI )

  29. Yuki Urabe, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Longest Lyndon Substring After Edit. Annual Symposium on Combinatorial Pattern Matching, CPM 2018, July 2-4, 2018 - Qingdao, China. 2018; 19:1-19:10. ( DOI )

  30. Mitsuaki Nishikimi, Atsushi Numaguchi, Kunihiko Takahashi, Shigeyuki Matsui, Naoyuki Matsuda: The authors reply. Crit Care Med. 2018; 46 (12): e1225-e1226. ( PubMed , DOI )

  31. Yoshiaki Minakata, Takashi Motegi, Jun Ueki, Yasuhiro Gon, Tetsuo Seki, Tatsuhiko Anzai, Shuhei Nakamura, Kazuto Hirata, Masakazu Ichinose: Efficacy of tiotropium/olodaterol on sedentary/active time in COPD patients: VESUTO study European Respiratory Journal. 2018; 52 ( DOI )

  32. Saeko Fukamachi, Masayuki Hashiguchi, Kunihiko Takahashi, Mayumi Mochizuki: Exploratory evaluation of a commercially available Japanese medical record database as an external control for comparative clinical trials in new drug development: Amyotrophic lateral sclerosis. Neurology and Clinical Neuroscience. 2018; 6 (4): 94-99. ( DOI )

  33. Mitsuaki Nishikimi, Atsushi Numaguchi, Kunihiko Takahashi, Yasuhiro Miyagawa, Kota Matsui, Michiko Higashi, Go Makishi, Shigeyuki Matsui, Naoyuki Matsuda: Effect of Administration of Ramelteon, a Melatonin Receptor Agonist, on the Duration of Stay in the ICU: A Single-Center Randomized Placebo-Controlled Trial. Crit. Care Med.. 2018; 46 (7): 1099-1105. ( PubMed , DOI )

  34. Takaharu Matsuhisa, Noriyuki Takahashi, Muneyoshi Aomatsu, Kunihiko Takahashi, Jo Nishino, Nobutaro Ban, Stewart W Mercer: How many patients are required to provide a high level of reliability in the Japanese version of the CARE Measure? A secondary analysis. BMC Fam Pract. 2018; 19 (1): 138. ( PubMed , DOI )

  35. Yoshiko Tominaga, Tohru Aomori, Tomohisa Hayakawa, Nobuhiko Kijima, Donald E Morisky, Kunihiko Takahashi, Mayumi Mochizuki: Possible associations of personality traits representing harm avoidance and self-directedness with medication adherence in Japanese patients with type 2 diabetes. J Pharm Health Care Sci. 2018; 4 16. ( PubMed , DOI )

  36. Mitsuaki Nishikimi, Takayuki Ogura, Kazuki Nishida, Kunihiko Takahashi, Kenji Fukaya, Keibun Liu, Mitsunobu Nakamura, Shigeyuki Matsui, Naoyuki Matsuda: Differential effect of mild therapeutic hypothermia depending on the findings of hypoxic encephalopathy on early CT images in patients with post-cardiac arrest syndrome. Resuscitation. 2018; 128 11-15. ( PubMed , DOI )

  37. Junya Okumura, Yuichiro Shindo, Kunihiko Takahashi, Masahiro Sano, Yasuteru Sugino, Tetsuya Yagi, Hiroyuki Taniguchi, Hideo Saka, Shigeyuki Matsui, Yoshinori Hasegawa: Mortality in patients with community-onset pneumonia at low risk of drug-resistant pathogens: Impact of β-lactam plus macrolide combination therapy. Respirology. 2018; 23 (5): 526-534. ( PubMed , DOI )

  38. Mitsuaki Nishikimi, Takayuki Ogura, Kota Matsui, Kunihiko Takahashi, Kenji Fukaya, Keibun Liu, Hideo Morita, Mitsunobu Nakamura, Shigeyuki Matsui, Naoyuki Matsuda: Accuracy of the first interpretation of early brain CT images for predicting the prognosis of post-cardiac arrest syndrome patients at the emergency department. J Intensive Care. 2018; 6 26. ( PubMed , DOI )

  39. Keibun Liu, Takayuki Ogura, Kunihiko Takahashi, Mitsunobu Nakamura, Hiroaki Ohtake, Kenji Fujiduka, Emi Abe, Hitoshi Oosaki, Dai Miyazaki, Hiroyuki Suzuki, Mitsuaki Nishikimi, Alan Kawarai Lefor, Takashi Mato: The safety of a novel early mobilization protocol conducted by ICU physicians: a prospective observational study. J Intensive Care. 2018; 6 10. ( PubMed , DOI )

  40. Tomoki Nakaya, Kunihiko Takahashi, Hideto Takahashi, Seiji Yasumura, Tetsuya Ohira, Hitoshi Ohto, Akira Ohtsuru, Sanae Midorikawa, Shinichi Suzuki, Hiroki Shimura, Shunichi Yamashita, Koichi Tanigawa, Kenji Kamiya: Spatial analysis of the geographical distribution of thyroid cancer cases from the first-round thyroid ultrasound examination in Fukushima Prefecture. Sci Rep. 2018; 8 (1): 17661. ( PubMed , DOI )

  41. Kunihiko Takahashi, Hideyasu Shimadzu: Multiple-cluster detection test for purely temporal disease clustering: Integration of scan statistics and generalized linear models. PLoS ONE. 2018; 13 (11): e0207821. ( PubMed , DOI )

  42. Masataka Igeta, Kunihiko Takahashi, Shigeyuki Matsui: Power and sample size calculation incorporating misspecifications of the variance function in comparative clinical trials with over-dispersed count data. Biometrics. 2018; 74 (4): 1459-1467. ( PubMed , DOI )

  43. Ken Horisaki, Kunihiko Takahashi, Hidemi Ito, Shigeyuki Matsui: A Dose-Response Meta-analysis of Coffee Consumption and Colorectal Cancer Risk in the Japanese Population: Application of a Cubic-Spline Model. J Epidemiol. 2018; 28 (12): 503-509. ( PubMed , DOI )

  44. Satoshi Kuriki, Kunihiko Takahashi, Hisayuki Hara: Multiplicity adjustment for temporal and spatial scan statistics using Markov property Japanese Journal of Statistics and Data Science. 2018; 1 (1): 191-231. ( DOI )

  45. Takayuki Ogura, Yoshihiko Nakamura, Kunihiko Takahashi, Kazuki Nishida, Daisuke Kobashi, Shigeyuki Matsui: Treatment of patients with sepsis in a closed intensive care unit is associated with improved survival: a nationwide observational study in Japan. J Intensive Care. 2018; 6 57. ( PubMed , DOI )

  46. Emiko Okada, Kunihiko Takahashi, Hidemi Takimoto, Saeka Takabayashi, Tomoko Kishi, Tohru Kobayashi, Koshi Nakamura, Shigekazu Ukawa, Mieko Nakamura, Satoshi Sasaki, Akiko Tamakoshi: Dietary patterns among Japanese adults: findings from the National Health and Nutrition Survey, 2012. Asia Pac J Clin Nutr. 2018; 27 (5): 1120-1130. ( PubMed , DOI )

  47. Y Tominaga, T Aomori, T Hayakawa, D E Morisky, K Takahashi, M Mochizuki: Relationship between medication adherence and glycemic control in Japanese patients with type 2 diabetes. Pharmazie. 2018; 73 (10): 609-612. ( PubMed , DOI )

  48. Mochimaru T., Fukunaga K., Kuwae M., Watanabe R., Okuzumi S., Baba R., Kamatani T., Tanosaki T., Matsusaka M., Ueda S., Betsuyaku T.: Neutrophil to Lymphocyte Ratio Is a Novel Predictor of Severe Exacerbation in Asthma Patients AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. 2018; 197

  49. Takanori Hasegawa, Kaname Kojima, Yosuke Kawai, Masao Nagasaki: Time-Series Filtering for Replicated Observations via a Kernel Approximate Bayesian Computation IEEE Trans. Signal Process. 2018; 66 (23): 6148-6161.

  1. James R Krycer, Katsuyuki Yugi, Akiyoshi Hirayama, Daniel J Fazakerley, Lake-Ee Quek, Richard Scalzo, Satoshi Ohno, Mark P Hodson, Satsuki Ikeda, Futaba Shoji, Kumi Suzuki, Westa Domanova, Benjamin L Parker, Marin E Nelson, Sean J Humphrey, Nigel Turner, Kyle L Hoehn, Gregory J Cooney, Tomoyoshi Soga, Shinya Kuroda, David E James: Dynamic Metabolomics Reveals that Insulin Primes the Adipocyte for Glucose Metabolism. Cell Rep. 2017.12; 21 (12): 3536-3547. ( PubMed , DOI )

  2. Kamatani Takashi, Fukunaga Koichi, Miyata Kaede, Shirasaki Yoshitaka, Tanaka Junji, Baba Rie, Matsusaka Masako, Kamatani Naoyuki, Moro Kazuyo, Betsuyaku Tomoko, Uemura Sotaro: Construction of a system using a deep learning algorithm to count cell numbers in nanoliter wells for viable single-cell experiments SCIENTIFIC REPORTS. 2017.12; 7 (1): 16831. ( PubMed , DOI )

  3. Kazuyuki Narisawa, Hideharu Hiratsuka, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Efficient Computation of Substring Equivalence Classes with Suffix Arrays Algorithmica. 2017.10; 79 (2): 291-318. ( DOI )

  4. Tomohiro Morita, Abidur Rahman, Takanori Hasegawa, Akihiko Ozaki, Tetsuya Tanimoto: The Potential Possibility of Symptom Checker. Int J Health Policy Manag. 2017.10; 6 (10): 615-616. ( PubMed , DOI )

  5. Mizumoto Hayato, Todoroki Shota, Diptarama, Yoshinaka Ryo, Shinohara Ayumi: An efficient query learning algorithm for zero-suppressed binary decision diagrams 28th International Conference on Algorithmic Learning Theory. 2017.10; 76 360-371.

  6. Katsunori Masaki, Koichi Fukunaga, Masako Matsusaka, Hiroki Kabata, Takae Tanosaki, Takao Mochimaru, Takashi Kamatani, Kengo Ohtsuka, Rie Baba, Soichiro Ueda, Yusuke Suzuki, Fumio Sakamaki, Yoshitaka Oyamada, Takashi Inoue, Tsuyoshi Oguma, Koichi Sayama, Hidefumi Koh, Morio Nakamura, Akira Umeda, Katsuhiko Kamei, Kenji Izuhara, Koichiro Asano, Tomoko Betsuyaku: Characteristics of severe asthma with fungal sensitization. Ann Allergy Asthma Immunol. 2017.09; 119 (3): 253-257. ( PubMed , DOI )

  7. Yuto Nakashima, Takashi Okabe, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Inferring strings from Lyndon factorization Theoretical Computer Science. 2017.08; 689 147-156. ( DOI )

  8. Position heaps for parameterized strings 2017.07; 78 8:1-8:13. ( DOI )

  9. Yusuke Nakano, Hirofumi Aso, Andrew Soper, Eri Yamada, Miyu Moriwaki, Guillermo Juarez-Fernandez, Yoshio Koyanagi, Kei Sato: A conflict of interest: the evolutionary arms race between mammalian APOBEC3 and lentiviral Vif Retrovirology. 2017.05; 14 (1): 31. ( PubMed , DOI )

  10. Andrew Soper, Guillermo Juarez-Fernandez, Hirofumi Aso, Miyu Moriwaki, Eri Yamada, Yusuke Nakano, Yoshio Koyanagi, Kei Sato: Various plus unique: Viral protein U as a plurifunctional protein for HIV-1 replication Experimental Biology and Medicine. 2017.04; 242 (8): 850-858. ( PubMed , DOI )

  11. Sato Ichinari, Diptarama, Chubachi Kaizaburo, Yoshinaka Ryo, Shinohara Ayumi: Analysis of laboratories electrical energy consumption by visualization for saving electrical energy International Journal of Institutional Research and Management. 2017.03; 1 (1): 53-66.

  12. Masakazu Ichinose, Yoshiaki Minakata, Takashi Motegi, Jun Ueki, Tetsuo Seki, Tatsuhiko Anzai, Ayako Takizawa, Lars Grönke, Kazuto Hirata: Study design of VESUTO; efficacy of tiotropium/olodaterol on lung hyperinflation, exercise capacity, and physical activity in Japanese patients with COPD Adv Ther. 2017; 34 (7): 1622-1635. ( PubMed , DOI )

  13. Hideo Bannai, Shunsuke Inenaga, Dominik Köppl: Computing All Distinct Squares in Linear Time for Integer Alphabets. 28th Annual Symposium on Combinatorial Pattern Matching, CPM 2017, July 4-6, 2017, Warsaw, Poland. 2017; 22:1-22:18. ( DOI )

  14. Takuya Mieno, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Tight Bounds on the Maximum Number of Shortest Unique Substrings. 28th Annual Symposium on Combinatorial Pattern Matching, CPM 2017, July 4-6, 2017, Warsaw, Poland. 2017; 24:1-24:11. ( DOI )

  15. Keita Kuboi, Yuta Fujishige, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Faster STR-IC-LCS Computation via RLE. 28th Annual Symposium on Combinatorial Pattern Matching, CPM 2017, July 4-6, 2017, Warsaw, Poland. 2017; 20:1-20:12. ( DOI )

  16. Yuta Fujishige, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Almost Linear Time Computation of Maximal Repetitions in Run Length Encoded Strings. 28th International Symposium on Algorithms and Computation, ISAAC 2017, December 9-12, 2017, Phuket, Thailand. 2017; 33:1-33:12. ( DOI )

  17. Yuto Nakashima, Hiroe Inoue, Takuya Mieno, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Shortest Unique Palindromic Substring Queries in Optimal Time. Combinatorial Algorithms - 28th International Workshop, IWOCA 2017, Newcastle, NSW, Australia, July 17-21, 2017, Revised Selected Papers. 2017; 397-408. ( DOI )

  18. Shiho Sugimoto, Naoki Noda, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Abelian String Regularities Based on RLE. Combinatorial Algorithms - 28th International Workshop, IWOCA 2017, Newcastle, NSW, Australia, July 17-21, 2017, Revised Selected Papers. 2017; 420-431. ( DOI )

  19. Yuto Nakashima, Takuya Takagi, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: On Reverse Engineering the Lyndon Tree. Proceedings of the Prague Stringology Conference 2017, Prague, Czech Republic, August 28-30, 2017. 2017; 108-117.

  20. Yuka Tanimura, Takaaki Nishimoto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Small-Space LCE Data Structure with Constant-Time Queries. 42nd International Symposium on Mathematical Foundations of Computer Science, MFCS 2017, August 21-25, 2017 - Aalborg, Denmark. 2017; 10:1-10:15. ( DOI )

  21. Temma Nakamura, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Order Preserving Pattern Matching on Trees and DAGs. String Processing and Information Retrieval - 24th International Symposium, SPIRE 2017, Palermo, Italy, September 26-29, 2017, Proceedings. 2017; 271-277. ( DOI )

  22. Hideo Bannai, Tomohiro, I, Shunsuke Inenaga, Yuto Nakashima, Masayuki Takeda, Kazuya Tsuruta: The "Runs" Theorem SIAM Journal on Computing. 2017; 46 (5): 1501-1514. ( DOI )

  23. Hideto Takahashi, Kunihiko Takahashi, Hiroki Shimura, Seiji Yasumura, Satoru Suzuki, Akira Ohtsuru, Sanae Midorikawa, Tetsuya Ohira, Hitoshi Ohto, Shunichi Yamashita, Kenji Kamiya: Simulation of expected childhood and adolescent thyroid cancer cases in Japan using a cancer-progression model based on the National Cancer Registry: Application to the first-round thyroid examination of the Fukushima Health Management Survey. Medicine (Baltimore). 2017; 96 (48): e8631. ( PubMed , DOI )

  24. Yasuyuki Okumura, Nobuo Sakata, Kunihiko Takahashi, Daisuke Nishi, Hisateru Tachimori: Epidemiology of overdose episodes from the period prior to hospitalization for drug poisoning until discharge in Japan: An exploratory descriptive study using a nationwide claims database. J Epidemiol. 2017; 27 (8): 373-380. ( PubMed , DOI )

  25. Akira Sayo, Shinji Ueno, Taro Kominami, Kazuki Nishida, Daiki Inooka, Ayami Nakanishi, Shunsuke Yasuda, Satoshi Okado, Kunihiko Takahashi, Shigeyuki Matsui, Hiroko Terasaki: Longitudinal study of visual field changes determined by Humphrey Field Analyzer 10-2 in patients with Retinitis Pigmentosa. Sci Rep. 2017; 7 (1): 16383. ( PubMed , DOI )

  26. Kunihiko Takahashi, Hisateru Tachimori, Chiemi Kan, Daisuke Nishi, Yasuyuki Okumura, Naohiro Kato, Tadashi Takeshima: Spatial analysis for regional behavior of patients with mental disorders in Japan. Psychiatry Clin. Neurosci.. 2017; 71 (4): 254-261. ( PubMed , DOI )

  27. Maki Takagishi, Masato Sawada, Shinya Ohata, Naoya Asai, Atsushi Enomoto, Kunihiko Takahashi, Liang Weng, Kaori Ushida, Hosne Ara, Shigeyuki Matsui, Kozo Kaibuchi, Kazunobu Sawamoto, Masahide Takahashi: Daple Coordinates Planar Polarized Microtubule Dynamics in Ependymal Cells and Contributes to Hydrocephalus. Cell Rep. 2017; 20 (4): 960-972. ( PubMed , DOI )

  28. Mitsuaki Nishikimi, Naoyuki Matsuda, Kota Matsui, Kunihiko Takahashi, Tadashi Ejima, Keibun Liu, Takayuki Ogura, Michiko Higashi, Hitoshi Umino, Go Makishi, Atsushi Numaguchi, Satoru Matsushima, Hideki Tokuyama, Mitsunobu Nakamura, Shigeyuki Matsui: A novel scoring system for predicting the neurologic prognosis prior to the initiation of induced hypothermia in cases of post-cardiac arrest syndrome: the CAST score. Scand J Trauma Resusc Emerg Med. 2017; 25 (1): 49. ( PubMed , DOI )

  29. Computing Longest Single-arm-gapped Palindromes in a String 2017; 10139 375-386. ( DOI )

  30. Yohei Ueki, Diptarama, Masatoshi Kurihara, Yoshiaki Matsuoka, Kazuyuki Narisawa, Ryo Yoshinaka, Hideo Bannai, Shunsuke Inenaga, Ayumi Shinohara: Longest Common Subsequence in at Least k Length Order-Isomorphic Substrings SOFSEM 2017: Theory and Practice of Computer Science. 2017; 363-374. ( DOI )

  1. Yoshiaki Matsuoka, Takahiro Aoki, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Generalized pattern matching and periodicity under substring consistent equivalence relations Theoretical Computer Science. 2016.12; 656 225-233. ( DOI )

  2. Tomohiro I, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Faster Lyndon factorization algorithms for SLP and LZ78 compressed text Theoretical Computer Science. 2016.12; 656 215-224. ( DOI )

  3. Takanori Sano, Kentaro Kawata, Satoshi Ohno, Katsuyuki Yugi, Hiroaki Kakuda, Hiroyuki Kubota, Shinsuke Uda, Masashi Fujii, Katsuyuki Kunida, Daisuke Hoshino, Atsushi Hatano, Yuki Ito, Miharu Sato, Yutaka Suzuki, Shinya Kuroda: Selective control of up-regulated and down-regulated genes by temporal patterns and doses of insulin. Sci Signal. 2016.11; 9 (455): ra112. ( PubMed , DOI )

  4. Sato Ichinari, Chubachi Kaizaburo, Diptarama: Evaluation of Machine Learning Methods on SPiCe International Conference on Grammatical Inference. 2016.10; 149-153.

  5. Golnaz Badkobeh, Hideo Bannai, Keisuke Goto, Tomohiro I, Costas S. Iliopoulos, Shunsuke Inenaga, Simon J. Puglisi, Shiho Sugimoto: Closed factorization Discrete Applied Mathematics. 2016.10; 212 23-29. ( DOI )

  6. Takanori Hasegawa, Kaname Kojima, Yosuke Kawai, Kazuharu Misawa, Takahiro Mimori, Masao Nagasaki: AP-SKAT: highly-efficient genome-wide rare variant association test. BMC Genomics. 2016.09; 17 (1): 745. ( PubMed , DOI )

  7. Seizo Koshiba, Ikuko Motoike, Kaname Kojima, Takanori Hasegawa, Matsuyuki Shirota, Tomo Saito, Daisuke Saigusa, Inaho Danjoh, Fumiki Katsuoka, Soichi Ogishima, Yosuke Kawai, Yumi Yamaguchi-Kabata, Miyuki Sakurai, Sachiko Hirano, Junichi Nakata, Hozumi Motohashi, Atsushi Hozawa, Shinichi Kuriyama, Naoko Minegishi, Masao Nagasaki, Takako Takai-Igarashi, Nobuo Fuse, Hideyasu Kiyomoto, Junichi Sugawara, Yoichi Suzuki, Shigeo Kure, Nobuo Yaegashi, Osamu Tanabe, Kengo Kinoshita, Jun Yasuda, Masayuki Yamamoto: The structural origin of metabolic quantitative diversity. Sci Rep. 2016.08; 6 31463. ( PubMed , DOI )

  8. Kojima K, Kawai Y, Nariai N, Mimori T, Hasegawa T, Nagasaki M: Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree. BMC genomics. 2016.08; 17 Suppl 5 494. ( PubMed , DOI )

  9. Diptarama, Yoshinaka R, Shinohara A: QBF encoding of generalized tic-Tac-Toe CEUR Workshop Proceedings. 2016.07; 1719 14-26.

  10. Junji Kurashige, Takanori Hasegawa, Atsushi Niida, Keishi Sugimachi, Niantao Deng, Kosuke Mima, Ryutaro Uchi, Genta Sawada, Yusuke Takahashi, Hidetoshi Eguchi, Masashi Inomata, Seigo Kitano, Takeo Fukagawa, Mitsuru Sasako, Hiroki Sasaki, Shin Sasaki, Masaki Mori, Kazuyoshi Yanagihara, Hideo Baba, Satoru Miyano, Patrick Tan, Koshi Mimori: Integrated Molecular Profiling of Human Gastric Cancer Identifies DDR2 as a Potential Regulator of Peritoneal Dissemination. Sci Rep. 2016.03; 6 22371. ( PubMed , DOI )

  11. Hasegawa Takanori, Niida Atsushi, Mori Tomoya, Shimamura Teppei, Yamaguchi Rui, Miyano Satoru, Akutsu Tatsuya, Imoto Seiya: A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models COMPUTATIONAL STATISTICS & DATA ANALYSIS. 2016.02; 94 63-74. ( DOI )

  12. Diptarama, Ueki Y, Narisawa K, Shinohara A: KMP based pattern matching algorithms for multi-track strings CEUR Workshop Proceedings. 2016.01; 1548 100-107.

  13. Fast Full Permuted Pattern Matching Algorithms on Multi-track Strings 2016; 7-21.

  14. Visualization and analysis of electrical energy consumption in laboratories 2016; 509-512. ( DOI )

  15. Takaaki Nishimoto, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Fully Dynamic Data Structure for LCE Queries in Compressed Space. 41st International Symposium on Mathematical Foundations of Computer Science, MFCS 2016, August 22-26, 2016 - Kraków, Poland. 2016; 72:1-72:15. ( DOI )

  16. Yuta Fujishige, Yuki Tsujimaru, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing DAWGs and Minimal Absent Words in Linear Time for Integer Alphabets. 41st International Symposium on Mathematical Foundations of Computer Science, MFCS 2016, August 22-26, 2016 - Kraków, Poland. 2016; 38:1-38:14. ( DOI )

  17. Takuya Mieno, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Shortest Unique Substring Queries on Run-Length Encoded Strings. 41st International Symposium on Mathematical Foundations of Computer Science, MFCS 2016, August 22-26, 2016 - Kraków, Poland. 2016; 69:1-69:11. ( DOI )

  18. Yuka Tanimura, Tomohiro I, Hideo Bannai, Shunsuke Inenaga, Simon J. Puglisi, Masayuki Takeda: Deterministic Sub-Linear Space LCE Data Structures With Efficient Construction. 27th Annual Symposium on Combinatorial Pattern Matching, CPM 2016, June 27-29, 2016, Tel Aviv, Israel. 2016; 1:1-1:10. ( DOI )

  19. Yoshiaki Matsuoka, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda, Florin Manea: Factorizing a String into Squares in Linear Time. 27th Annual Symposium on Combinatorial Pattern Matching, CPM 2016, June 27-29, 2016, Tel Aviv, Israel. 2016; 27:1-27:12. ( DOI )

  20. Eiji Sadashima, Satoshi Hattori, Kunihiko Takahashi: Meta-analysis of prognostic studies for a biomarker with a study-specific cutoff value. Res Synth Methods. 2016; 7 (4): 402-419. ( PubMed , DOI )

  21. Mitsuaki Nishikimi, Naoyuki Matsuda, Kota Matsui, Kunihiko Takahashi, Tadashi Ejima, Keibun Liu, Takayuki Ogura, Michiko Higashi, Hitoshi Umino, Go Makishi, Atsushi Numaguchi, Satoru Matsushima, Hideki Tokuyama, Mitsunobu Nakamura, Shigeyuki Matsui: CAST: a new score for early prediction of neurological outcomes after cardiac arrest before therapeutic hypothermia with high accuracy. Intensive Care Med. 2016; 42 (12): 2106-2107. ( PubMed , DOI )

  22. Emi Ayada, Takanori Hasegawa, Atsushi Niida, Satoru Miyano, Seiya Imoto: Binary contingency table method for analysing gene mutation in cancer genome 2016; 12 (3): 211-226.

  23. T. Hasegawa, S. Hayashi, E. Shimizu, S. Mizuno, R. Yamaguchi, S. Miyano, H. Nakagawa, S. Imoto: An in silico automated pipeline to identify tumor specic neoantigens from whole genome and exome sequencing data Proceeding of 12th International Symposium on Bioinformatics Research and Applications. 2016;

  24. Yuta Fujishige, Michitaro Nakamura, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Finding Gapped Palindromes Online Combinatorial Algorithms. 2016; 9843 191-202. ( DOI )

  25. Drawing Strategies for Generalized Tic-Tac-Toe (p, q) 2016; 1705 ( DOI )

  26. Hiroe Inoue, Yoshiaki Matsuoka, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Smallest and Largest Repetition Factorizations in O(n log n) Time PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2016. 2016; 135-145.

  27. Takaaki Nishimoto, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Dynamic Index and LZ Factorization in Compressed Space PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2016. 2016; 158-171.

  28. AC-automaton update algorithm for semi-dynamic dictionary matching 2016; 9954 110-121. ( DOI )

  1. Yuto Nakashima, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Constructing LZ78 tries and position heaps in linear time for large alphabets Information Processing Letters. 2015.09; 115 (9): 655-659. ( DOI )

  2. Emi Ayada, Atsushi Niida, Takanori Hasegawa, Satoru Miyano, Seiya Imoto: Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome BIOINFORMATICS RESEARCH AND APPLICATIONS (ISBRA 2015). 2015.06; 9096 12-23.

  3. Hasegawa T, Mori T, Yamaguchi R, Shimamura T, Miyano S, Imoto S, Akutsu T: Genomic data assimilation using a higher moment filtering technique for restoration of gene regulatory networks. BMC systems biology. 2015.03; 9 14. ( PubMed , DOI )

  4. Kaori Nomura, Kunihiko Takahashi, Yasushi Hinomura, Genta Kawaguchi, Yasuyuki Matsushita, Hiroko Marui, Tatsuhiko Anzai, Masayuki Hashiguchi, Mayumi Mochizuki: Effect of database profile variation on drug safety assessment: an analysis of spontaneous adverse event reports of Japanese cases. Drug Des Devel Ther. 2015; 9 3031-3041. ( PubMed , DOI )

  5. Takashi Kamatani, Takemichi Okada, Hiroyoshi Iguchi, Yoshihito Takahashi, Hiroaki Yokomori: Liver abscess caused by Salmonella choleraesuis. Int J Gen Med. 2015; 8 155-161. ( PubMed , DOI )

  6. Hideo Bannai, Tomohiro I, Shunsuke Inenaga, Yuto Nakashima, Masayuki Takeda, Kazuya Tsuruta: A new characterization of maximal repetitions by Lyndon trees. Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, SODA 2015, San Diego, CA, USA, January 4-6, 2015. 2015; 562-571. ( DOI )

  7. Takaaki Nishimoto, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Left-Right Maximal Generic Words. Proceedings of the Prague Stringology Conference 2015, Prague, Czech Republic, August 24-26, 2015. 2015; 5-16.

  8. Keisuke Goto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: LZD Factorization: Simple and Practical Online Grammar Compression with Variable-to-Fixed Encoding. Combinatorial Pattern Matching - 26th Annual Symposium, CPM 2015, Ischia Island, Italy, June 29 - July 1, 2015, Proceedings. 2015; 219-230. ( DOI )

  9. Yoshiaki Matsuoka, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Semi-dynamic Compact Index for Short Patterns and Succinct van Emde Boas Tree. Combinatorial Pattern Matching - 26th Annual Symposium, CPM 2015, Ischia Island, Italy, June 29 - July 1, 2015, Proceedings. 2015; 355-366. ( DOI )

  10. Kunihiko Takahashi, Hideyasu Shimadzu: The daily incidence of out-of-hospital cardiac arrest unexpectedly increases around New Year's Day in Japan. Resuscitation. 2015; 96 156-162. ( PubMed , DOI )

  11. Kaori Nomura, Kunihiko Takahashi, Yasushi Hinomura, Genta Kawaguchi, Yasuyuki Matsushita, Hiroko Marui, Tatsuhiko Anzai, Masayuki Hashiguchi, Mayumi Mochizuki: Effect of database profile variation on drug safety assessment: an analysis of spontaneous adverse event reports of Japanese cases. Drug Des Devel Ther. 2015; 9 3031-3041. ( PubMed , DOI )

  12. Kaname Kojima, Yosuke Kawai, Naoki Nariai, Takahiro Mimori, Takanori Hasegawa, Masao Nagasaki: Short Tandem Repeat Number Estimation from Paired-end Sequence Reads by Considering Unobserved Genealogy of Multiple Individuals BIOINFORMATICS RESEARCH AND APPLICATIONS. 2015; 9096 422-423.

  13. Yuka Tanimura, Yuta Fujishige, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: A Faster Algorithm for Computing Maximal alpha-gapped Repeats in a String STRING PROCESSING AND INFORMATION RETRIEVAL (SPIRE 2015). 2015; 9309 124-136. ( DOI )

  14. Makoto Nishida, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Inferring Strings from Full Abelian Periods ALGORITHMS AND COMPUTATION, ISAAC 2015. 2015; 9472 768-779. ( DOI )

  15. Hideo Bannai, Shunsuke Inenaga, Tomasz Kociumaka, Arnaud Lefebvre, Jakub Radoszewski, Wojciech Rytter, Shiho Sugimoto, Tomasz Walen: Efficient Algorithms for Longest Closed Factor Array STRING PROCESSING AND INFORMATION RETRIEVAL (SPIRE 2015). 2015; 9309 95-102. ( DOI )

  16. Yuya Tamakoshi, Keisuke Goto, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: An Opportunistic Text Indexing Structure Based on Run Length Encoding ALGORITHMS AND COMPLEXITY (CIAC 2015). 2015; 9079 390-402. ( DOI )

  17. Hideo Bannai, Travis Gagie, Shunsuke Inenaga, Juha Karkkainen, Dominik Kempa, Marcin Piatkowski, Simon J. Puglisi, Shiho Sugimoto: Diverse Palindromic Factorization Is NP-complete DEVELOPMENTS IN LANGUAGE THEORY (DLT 2015). 2015; 9168 85-96. ( DOI )

  1. Hasegawa T, Mori T, Yamaguchi R, Imoto S, Miyano S, Akutsu T: An efficient data assimilation schema for restoration and extension of gene regulatory networks using time-course observation data. Journal of computational biology : a journal of computational molecular cell biology. 2014.11; 21 (11): 785-98. ( PubMed , DOI )

  2. Takashi Kamatani, Hiroyoshi Iguchi, Takemichi Okada, Hitoshi Yamazaki, Hidekazu Tsunoda, Masaaki Watanabe, Masaya Oda, Makoto Ohbu, Hiroaki Yokomori: Co-registered positron emission tomography/computed tomography and gadolinium-ethoxybenzyl-diethylenetriamine pentaacetic acid magnetic resonance imaging features of multiple angiosarcoma of the liver. Hepatol Res. 2014.10; 44 (10): E297-E303. ( PubMed , DOI )

  3. Hasegawa T, Nagasaki M, Yamaguchi R, Imoto S, Miyano S: An efficient method of exploring simulation models by assimilating literature and biological observational data. Bio Systems. 2014.07; 121 54-66. ( PubMed , DOI )

  4. Kento Tokuyama, Satoshi Ohno, Katsunori Yoshikawa, Takashi Hirasawa, Shotaro Tanaka, Chikara Furusawa, Hiroshi Shimizu: Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli. Microbial Cell Factories. 2014.05; 13 64. ( PubMed , DOI )

  5. Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa: FastPros: screening of reaction knockout strategies for metabolic engineering. Bioinformatics. 2014.04; 30 (7): 981-987. ( PubMed , DOI )

  6. Nobutaka Nakashima, Satoshi Ohno, Katsunori Yoshikawa, Hiroshi Shimizu, Tomohiro Tamura: A vector library for silencing central carbon metabolism genes with antisense RNAs in Escherichia coli. Applied and Environmental Microbiology. 2014.01; 80 (2): 564-573. ( PubMed , DOI )

  7. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Inferring strings from suffix trees and links on a binary alphabet DISCRETE APPLIED MATHEMATICS. 2014.01; 163 316-325. ( DOI )

  8. Eiichi Bannai, Etsuko Bannai, Hideo Bannai: On the existence of tight relative 2-designs on binary Hamming association schemes DISCRETE MATHEMATICS. 2014.01; 314 17-37. ( DOI )

  9. Golnaz Badkobeh, Hideo Bannai, Keisuke Goto, Tomohiro I, Costas, S. Iliopoulos, Shunsuke Inenaga, Simon J. Puglisi, Shiho Sugimoto: Closed Factorization. Proceedings of the Prague Stringology Conference 2014, Prague, Czech Republic, September 1-3, 2014. 2014; 162-168.

  10. Jun-ichi Yamamoto, Tomohiro I, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Faster Compact On-Line Lempel-Ziv Factorization. 31st International Symposium on Theoretical Aspects of Computer Science (STACS 2014), STACS 2014, March 5-8, 2014, Lyon, France. 2014; 675-686. ( DOI )

  11. Shohei Matsuda, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Abelian Covers and Abelian Runs. Proceedings of the Prague Stringology Conference 2014, Prague, Czech Republic, September 1-3, 2014. 2014; 43-51.

  12. Keisuke Goto, Hideo Bannai: Space Efficient Linear Time Lempel-Ziv Factorization for Small Alphabets. Data Compression Conference, DCC 2014, Snowbird, UT, USA, 26-28 March, 2014. 2014; 163-172. ( DOI )

  13. Tatsuya Kubokawa, Mana Hasukawa, Kunihiko Takahashi: On measuring uncertainty of benchmarked predictors with application to disease risk estimate. Scandinavian Journal of Statistics. 2014; 41 394-413. ( DOI )

  14. Daisuke Ogino, Kunihiko Takahashi, Hajime Sato: Characteristics of clinical trial websites: information distribution between ClinicalTrials.gov and 13 primary registries in the WHO registry network. Trials. 2014; 15 428. ( PubMed , DOI )

  15. Tsutomu Nakashima, Hiroaki Sato, Kiyofumi Gyo, Naohito Hato, Tadao Yoshida, Mariko Shimono, Masaaki Teranishi, Michihiko Sone, Yukari Fukunaga, Gen Kobashi, Kunihiko Takahashi, Shigeyuki Matsui, Kaoru Ogawa: Idiopathic sudden sensorineural hearing loss in Japan. Acta Otolaryngol.. 2014; 134 (11): 1158-1163. ( PubMed , DOI )

  16. Hasegawa T, Yamaguchi R, Nagasaki M, Miyano S, Imoto S: Inference of gene regulatory networks incorporating multi-source biological knowledge via a state space model with L1 regularization. PloS one. 2014; 9 (8): e105942. ( PubMed , DOI )

  17. Tomohiro, I, Shiho Sugimoto, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Palindromic Factorizations and Palindromic Covers On-line COMBINATORIAL PATTERN MATCHING, CPM 2014. 2014; 8486 150-161. ( DOI )

  18. Kazuya Tsuruta, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Shortest Unique Substrings Queries in Optimal Time SOFSEM 2014: THEORY AND PRACTICE OF COMPUTER SCIENCE. 2014; 8327 503-513. ( DOI )

  19. Yuto Nakashima, Takashi Okabe, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Inferring Strings from Lyndon Factorization MATHEMATICAL FOUNDATIONS OF COMPUTER SCIENCE, PT II. 2014; 8635 565-576. ( DOI )

  1. Satoshi Ohno, Chikara Furusawa, Hiroshi Shimizu: In silico screening of triple reaction knockout Escherichia coli strains for overproduction of useful metabolites. J Biosci Bioeng. 2013.02; 115 (2): 221-228. ( PubMed , DOI )

  2. Hiroshi Yokomichi, Tetsuji Yokoyama, Kunihiko Takahashi, Nobuo Yoshiike, Zentaro Yamagata, Toshiro Tango: An improved statistical method to estimate usual intake distribution of nutrients by age group Journal of Nutrition & Food Sciences. 2013; 3 196. ( DOI )

  3. Kunihiko Takahashi, Hiroyuki Nakao, Satoshi Hattori: Cubic spline regression of J-shaped dose-response curves with likelihood-based assignments of grouped exposure levels Journal of Biometrics & Biostatistics. 2013; 4 181. ( DOI )

  4. Tomohiro I, Takaaki Nishimoto, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Compressed Automata for Dictionary Matching. Implementation and Application of Automata - 18th International Conference, CIAA 2013, Halifax, NS, Canada, July 16-19, 2013. Proceedings. 2013; 319-330. ( DOI )

  5. Shiho Sugimoto, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Reversed Lempel-Ziv Factorization Online. Proceedings of the Prague Stringology Conference 2013, Prague, Czech Republic, September 2-4, 2013. 2013; 107-118.

  6. Toshiya Tanaka, Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Convolution on Grammar-Compressed Text. 2013 Data Compression Conference, DCC 2013, Snowbird, UT, USA, March 20-22, 2013. 2013; 451-460. ( DOI )

  7. Takashi Katsura, Kazuyuki Narisawa, Ayumi Shinohara, Hideo Bannai, Shunsuke Inenaga: Permuted Pattern Matching on Multi-track Strings. SOFSEM 2013: Theory and Practice of Computer Science, 39th International Conference on Current Trends in Theory and Practice of Computer Science, Špindlerův Mlýn, Czech Republic, January 26-31, 2013. Proceedings. 2013; 280-291. ( DOI )

  8. Keisuke Goto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Fast q-gram mining on SLP compressed strings. J. Discrete Algorithms. 2013; 18 89-99. ( DOI )

  9. Hideo Bannai, Pawel Gawrychowski, Shunsuke Inenaga, Masayuki Takeda: Converting SLP to LZ78 in almost Linear Time. Combinatorial Pattern Matching, 24th Annual Symposium, CPM 2013, Bad Herrenalb, Germany, June 17-19, 2013. Proceedings. 2013; 38-49. ( DOI )

  10. Tomohiro, I, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Efficient Lyndon Factorization of Grammar Compressed Text COMBINATORIAL PATTERN MATCHING. 2013; 7922 153-164. ( DOI )

  11. Tomohiro, I, Wataru Matsubara, Kouji Shimohira, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda, Kazuyuki Narisawa, Ayumi Shinohara: Detecting Regularities on Grammar-Compressed Strings MATHEMATICAL FOUNDATIONS OF COMPUTER SCIENCE 2013. 2013; 8087 571-582. ( DOI )

  12. Tomohiro, I, Yuto Nakashima, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Faster Lyndon Factorization Algorithms for SLP and LZ78 Compressed Text STRING PROCESSING AND INFORMATION RETRIEVAL (SPIRE 2013). 2013; 8214 174-185. ( DOI )

  13. Keisuke Goto, Hideo Bannai: Simpler and Faster Lempel Ziv Factorization 2013 DATA COMPRESSION CONFERENCE (DCC). 2013; 133-142. ( DOI )

  14. Yuya Tamakoshi, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: From Run Length Encoding to LZ78 and Back Again 2013 DATA COMPRESSION CONFERENCE (DCC). 2013; 143-152. ( DOI )

  1. Hideo Bannai, Travis Gagie, Tomohiro, I, Shunsuke Inenaga, Gad M. Landau, Moshe Lewenstein: An efficient algorithm to test square-freeness of strings compressed by straight-line programs INFORMATION PROCESSING LETTERS. 2012.10; 112 (19): 711-714. ( DOI )

  2. Yuriko Saiki, Yuki Yoshino, Hiroko Fujimura, Tatsuya Manabe, Yuki Kudo, Miki Shimada, Nariyasu Mano, Tomohiro Nakano, Yoonha Lee, Shinjiro Shimizu, Shinya Oba, Sho Fujiwara, Hideyuki Shimizu, Na Chen, Zhaleh Kashkouli Nezhad, Guo Jin, Shinichi Fukushige, Makoto Sunamura, Masaharu Ishida, Fuyuhiko Motoi, Shinichi Egawa, Michiaki Unno, Akira Horii: DCK is frequently inactivated in acquired gemcitabine-resistant human cancer cells Biochem Biophys Res Commun.. 2012.04; 421 (1): 98-104. ( PubMed , DOI )

  3. Shunsuke Inenaga, Hideo Bannai: FINDING CHARACTERISTIC SUBSTRINGS FROM COMPRESSED TEXTS INTERNATIONAL JOURNAL OF FOUNDATIONS OF COMPUTER SCIENCE. 2012.02; 23 (2): 261-280. ( DOI )

  4. Toshiro Tango, Kunihiko Takahashi: A flexible spatial scan statistic with a restricted likelihood ratio for detecting disease clusters. Stat Med. 2012; 31 (30): 4207-4218. ( PubMed , DOI )

  5. Yoko Anan, Kohei Hatano, Hideo Bannai, Masayuki Takeda, Ken Satoh: Polyphonic Music Classification on Symbolic Data Using Dissimilarity Functions. Proceedings of the 13th International Society for Music Information Retrieval Conference, ISMIR 2012, Mosteiro S.Bento Da Vitória, Porto, Portugal, October 8-12, 2012. 2012; 229-234.

  6. Tomohiro I, Yuki Enokuma, Hideo Bannai, Masayuki Takeda: General Algorithms for Mining Closed Flexible Patterns under Various Equivalence Relations. Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2012, Bristol, UK, September 24-28, 2012. Proceedings, Part II. 2012; 435-450. ( DOI )

  7. Keisuke Goto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Speeding Up q-Gram Mining on Grammar-Based Compressed Texts. Combinatorial Pattern Matching - 23rd Annual Symposium, CPM 2012, Helsinki, Finland, July 3-5, 2012. Proceedings. 2012; 220-231. ( DOI )

  8. Kazuhito Hagio, Takashi Ohgami, Hideo Bannai, Masayuki Takeda: Eager XPath Evaluation over XML Streams STRING PROCESSING AND INFORMATION RETRIEVAL. 2012; 7608 245-250. ( DOI )

  9. Keisuke Goto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Computing q-Gram Non-overlapping Frequencies on SLP Compressed Texts SOFSEM 2012: THEORY AND PRACTICE OF COMPUTER SCIENCE. 2012; 7147 301-312. ( DOI )

  10. Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Efficient LZ78 Factorization of Grammar Compressed Text STRING PROCESSING AND INFORMATION RETRIEVAL. 2012; 7608 86-98. ( DOI )

  11. Yuto Nakashima, Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: The Position Heap of a Trie STRING PROCESSING AND INFORMATION RETRIEVAL. 2012; 7608 360-371. ( DOI )

  1. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Verifying and enumerating parameterized border arrays THEORETICAL COMPUTER SCIENCE. 2011.11; 412 (50): 6959-6981. ( DOI )

  2. Shimizu H, Horii A, Sunamura M, Motoi F, Egawa S, Unno M, Fukushige S: Identification of epigenetically silenced genes in human pancreatic cancer by a novel method "microarray coupled with methyl-CpG targeted transcriptional activation" (MeTA-array) Biochem Biophys Res Commun.. 2011.07; 411 (1): 162-167. ( PubMed , DOI )

  3. Takanori Hasegawa, Rui Yamaguchi, Masao Nagasaki, Seiya Imoto, Satoru Miyano: Poster: Comprehensive pharmacogenomic pathway screening by data assimilation IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences(ICCABS). 2011.02; 246.

  4. Toshiro Tango, Kunihiko Takahashi, Kazuaki Kohriyama: A space-time scan statistic for detecting emerging outbreaks. Biometrics. 2011; 67 (1): 106-115. ( PubMed , DOI )

  5. Takeshi Nishiyama, Kunihiko Takahashi, Toshiro Tango, Dalila Pinto, Stephen W Scherer, Satoshi Takami, Hirohisa Kishino: A scan statistic to extract causal gene clusters from case-control genome-wide rare CNV data. BMC Bioinformatics. 2011; 12 205. ( PubMed , DOI )

  6. Yoko Anan, Kohei Hatano, Hideo Bannai, Masayuki Takeda: Music Genre Classification using Similarity Functions. Proceedings of the 12th International Society for Music Information Retrieval Conference, ISMIR 2011, Miami, Florida, USA, October 24-28, 2011. 2011; 693-698.

  7. Kouji Shimohira, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Computing Longest Common Substring/Subsequence of Non-linear Texts PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2011. 2011; 197-208.

  8. Kazuhito Hagio, Takashi Ohgami, Hideo Bannai, Masayuki Takeda: Efficient Eager XPath Filtering over XML Streams PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2011. 2011; 30-44.

  9. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Inferring Strings from Suffix Trees and Links on a Binary Alphabet PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2011. 2011; 121-131.

  10. Takanori Hasegawa, Rui Yamaguchi, Masao Nagasaki, Seiya Imoto, Satoru Miyano: Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation BIOINFORMATICS RESEARCH AND APPLICATIONS. 2011; 6674 160-171.

  11. Takanori Yamamoto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Faster Subsequence and Don't-Care Pattern Matching on Compressed Texts COMBINATORIAL PATTERN MATCHING, 22ND ANNUAL SYMPOSIUM, CPM 2011. 2011; 6661 309-322. ( DOI )

  12. Keisuke Goto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Fast q-gram Mining on SLP Compressed Strings STRING PROCESSING AND INFORMATION RETRIEVAL. 2011; 7024 278-289. ( DOI )

  1. Tomoko Tachibana, Kunihiko Takahashi, Toyoo Sakurayama: Factors causing the rapid turnover among novice nursing staff: analyses of the survey conducted in 2006 on the employment situation of nursing staff in the Tokyo metropolitan area. Journal of the National Institute of Public Health. 2010; 59 (2): 178-187. ( 医中誌 )

  2. Yuriko Doi, Testuji Yokoyama, Toshiro Tango, Kunihiko Takahashi, Kenichi Fujimoto, Imaharu Nakano: Temporal trends and geographic clusters of mortality from amyotrophic lateral sclerosis in Japan, 1995-2004. J. Neurol. Sci.. 2010; 298 (1-2): 78-84. ( PubMed , DOI )

  3. Kunihiko Takahashi, Toshiro Tango: Assignment of grouped exposure levels for trend estimation in a regression analysis of summarized data. Stat Med. 2010; 29 (25): 2605-2616. ( PubMed , DOI )

  4. Takeo Fujiwara, Makiko Okuyama, Kunihiko Takahashi: Paternal involvement in childcare and unintentional injury of young children: a population-based cohort study in Japan. Int J Epidemiol. 2010; 39 (2): 588-597. ( PubMed , DOI )

  5. Kazuaki Kashihara, Kohei Hatano, Hideo Bannai, Masayuki Takeda: Sparse Substring Pattern Set Discovery Using Linear Programming Boosting DISCOVERY SCIENCE, DS 2010. 2010; 6332 132-143. ( DOI )

  6. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Counting and Verifying Maximal Palindromes STRING PROCESSING AND INFORMATION RETRIEVAL. 2010; 6393 135-+. ( DOI )

  7. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Verifying a Parameterized Border Array in O(n(1.5)) Time COMBINATORIAL PATTERN MATCHING, PROCEEDINGS. 2010; 6129 238-+. ( DOI )

  8. Hideo Bannai, Mathieu Giraud, Kazuhiko Kusano, Wataru Matsubara, Ayumi Shinohara, Jamie Simpson: The Number of Runs in a Ternary Word PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2010. 2010; 178-181.

  1. Yoshimi Yashiro, Hideo Bannai, Takashi Minowa, Tomohide Yabiku, Satoru Miyano, Mitsujiro Osawa, Atsushi Iwama, Hiromitsu Nakauchi: Transcriptional profiling of hematopoietic stem cells by high-throughput sequencing International Journal of Hematology. 2009.01; 89 (1): 24-33. ( DOI )

  2. Ryosuke Nakamura, Shunsuke Inenaga, Hideo Bannai, Takashi Funamoto, Masayuki Takeda, Ayumi Shinohara: Linear-Time Text Compression by Longest-First Substitution. Algorithms. 2009; 2 (4): 1429-1448. ( DOI )

  3. Takanori Yamamoto, Hideo Bannai, Masao Nagasaki, Satoru Miyano: Better Decomposition Heuristics for the Maximum-Weight Connected Graph Problem Using Betweenness Centrality DISCOVERY SCIENCE, PROCEEDINGS. 2009; 5808 465-+. ( DOI )

  4. Tomohiro, I, Satoshi Deguchi, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Lightweight Parameterized Suffix Array Construction COMBINATORIAL ALGORITHMS. 2009; 5874 312-+. ( DOI )

  5. Shunsuke Inenaga, Hideo Bannai: Finding Characteristic Substrings from Compressed Texts PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2009. 2009; 40-54.

  6. Kazunori Hirashima, Hideo Bannai, Wataru Matsubara, Akira Ishino, Ayumi Shinohara: Bit-parallel algorithms for computing all the runs in a string PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2009. 2009; 203-213.

  7. Tomohiro, I, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: Counting Parameterized Border Arrays for a Binary Alphabet LANGUAGE AND AUTOMATA THEORY AND APPLICATIONS. 2009; 5457 422-+. ( DOI )

  8. Wataru Matsubara, Kazuhiko Kusano, Hideo Bannai, Ayumi Shinohara: A Series of Run-Rich Strings LANGUAGE AND AUTOMATA THEORY AND APPLICATIONS. 2009; 5457 578-+. ( DOI )

  1. Eiichi Bannai, Etsuko Bannai, Hideo Bannai: Uniqueness of certain association schemes EUROPEAN JOURNAL OF COMBINATORICS. 2008.08; 29 (6): 1379-1395. ( DOI )

  2. Yasuto Higa, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Reachability on suffix tree graphs INTERNATIONAL JOURNAL OF FOUNDATIONS OF COMPUTER SCIENCE. 2008.02; 19 (1): 147-162. ( DOI )

  3. Kunihiko Takahashi, Martin Kulldorff, Toshiro Tango, Katherine Yih: A flexibly shaped space-time scan statistic for disease outbreak detection and monitoring. Int J Health Geogr. 2008; 7 14. ( PubMed , DOI )

  4. Y Doi, T Yokoyama, M Sakai, Y Nakamura, T Tango, K Takahashi: Spatial clusters of Creutzfeldt-Jakob disease mortality in Japan between 1995 and 2004. Neuroepidemiology. 2008; 30 (4): 222-228. ( PubMed , DOI )

  5. Anzai T, Shimadzu H, Endo T: Modelling duration of necessary and non-necessary activities in daily life: fitting mixture models to Japanese time use survey data. Proceedings of the 23rd International Workshop on Statistical Modelling (Ed. P. Eilers). 2008; 93-98.

  6. Wataru Matsubara, Kazuhiko Kusano, Akira Ishino, Hideo Bannai, Ayumi Shinohara: New Lower Bounds for the Maximum Number of Runs in a String PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2008. 2008; 140-145.

  7. Kazuyuki Narisawa, Hideo Bannai, Kohei Hatano, Shunsuke Inenaga, Masayuki Takeda: String Kernels Based on Variable-Length-Don't-Care Patterns DISCOVERY SCIENCE, PROCEEDINGS. 2008; 5255 308-+. ( DOI )

  8. Satoshi Deguchi, Fumihito Higashijima, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Parameterized Suffix Arrays for Binary Strings PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2008. 2008; 84-94.

  1. Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott: On the complexity of deriving position specific score matrices from positive and negative sequences DISCRETE APPLIED MATHEMATICS. 2007.04; 155 (6-7): 676-685. ( DOI )

  2. Hideo Bannai: Algorithms for string pattern discovery Modeling Decisions for Artificial Intelligence, Proceedings. 2007; 4617 24-29. ( DOI )

  3. Ryosuke Nakamura, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Simple linear-time off-line text compression by longest-first substitution DCC 2007: DATA COMPRESSION CONFERENCE, PROCEEDINGS. 2007; 123-+. ( DOI )

  4. Kazuyuki Narisawa, Hideo Bannai, Kohei Hatano, Masayuki Takeda: Unsupervised spam detection based on string alienness measures DISCOVERY SCIENCE, PROCEEDINGS. 2007; 4755 161-+. ( DOI )

  5. Kazuyuki Narisawa, Shunsuke Inenaga, Hideo Barmai, Masayuki Takeda: Efficient computation of substring equivalence classes with suffix arrays COMBINATORIAL PATTERN MATCHING, PROCEEDINGS. 2007; 4580 340-+. ( DOI )

  1. Yoshio Takei, Akatsuki Kawakoshi, Takehiro Tsukada, Shinya Yuge, Maho Ogoshi, Koji Inoue, Susumu Hyodo, Hideo Bannai, Satoru Miyano: Contribution of comparative fish studies to general endocrinology: structure and function of some osmoregulatory hormones Journal of Experimental Zoology Part A: Comparative Experimental Biology. 2006.09; 305A (9): 787-798. ( DOI )

  2. Kunihiko Takahashi, Toshiro Tango: An extended power of cluster detection tests. Stat Med. 2006; 25 (5): 841-852. ( PubMed , DOI )

  3. Yasuto Higa, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda: Reachability on suffix tree graphs. Proceedings of the Prague Stringology Conference, Prague, Czech Republic, August 28-30, 2006. 2006; 212-225.

  4. Yasuto Higa, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda: A new family of string classifiers based on local relatedness DISCOVERY SCIENCE, PROCEEDINGS. 2006; 4265 114-124. ( DOI )

  1. YOSHINORI TAMADA, HIDEO BANNAI, SEIYA IMOTO, TOSHIAKI KATAYAMA, MINORU KANEHISA, SATORU MIYANO: UTILIZING EVOLUTIONARY INFORMATION AND GENE EXPRESSION DATA FOR ESTIMATING GENE NETWORKS WITH BAYESIAN NETWORK MODELS Journal of Bioinformatics and Computational Biology. 2005.12; 03 (06): 1295-1313. ( DOI )

  2. Toshiro Tango, Kunihiko Takahashi: A flexibly shaped spatial scan statistic for detecting clusters. Int J Health Geogr. 2005; 4 11. ( PubMed , DOI )

  3. O Hirose, N Nariai, Y Tamada, H Bannai, S Imoto, S Miyano: Estimating gene networks from expression data and binding location data via Boolean networks COMPUTATIONAL SCIENCE AND ITS APPLICATIONS - ICCSA 2005, PT 3. 2005; 3482 349-356. ( DOI )

  4. H Bannai, K Hatano, S Inenaga, M Takeda: Practical algorithms for pattern based linear regression DISCOVERY SCIENCE, PROCEEDINGS. 2005; 3735 44-56. ( DOI )

  1. H Bannai, H Hyyro, A Shinohara, M Takeda, K Nakai, S Miyano: An O(N-2) algorithm for discovering optimal boolean pattern pairs IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS. 2004.10; 1 (4): 159-170. ( DOI )

  2. Yoshio Takei, Koji Inoue, Maho Ogoshi, Tetsushi Kawahara, Hideo Bannai, Satoru Miyano: Identification of novel adrenomedullin in mammals: a potent cardiovascular and renal regulator FEBS Letters. 2004.01; 556 (1-3): 53-58. ( DOI )

  3. Hideo Bannai, Shunsuke Inenaga, Ayumi Shinohara, Masayuki Takeda, Satoru Miyano: Efficiently Finding Regulatory Elements Using Correlation with Gene Expression. J. Bioinformatics and Computational Biology. 2004; 2 (2): 273-288. ( DOI )

  4. H Bannai, H Hyyro, A Shinohara, M Takeda, K Nakai, S Miyano: Finding optimal pairs of patterns ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS. 2004; 3240 450-462. ( DOI )

  5. Shunsuke Inenaga, Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano: Finding Optimal Pairs of Cooperative and Competing Patterns with Bounded Distance Discovery Science. 2004; 32-46. ( DOI )

  1. Y. Tamada, S. Kim, H. Bannai, S. Imoto, K. Tashiro, S. Kuhara, S. Miyano: Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection Bioinformatics. 2003.09; 19 (Suppl 2): ii227-ii236. ( DOI )

  2. Eijiro Sumii, Hideo Bannai: The Extension of ML with Hypothetical Views for Discovery Science: Formalization and Implementation. Journal of Functional and Logic Programming. 2003; 2003

  3. Ott, S., Tamada, Y., Bannai, H., Nakai, K., Miyano, S.: Intrasplicing--analysis of long intron sequences. Pacific Symposium on Biocomputing. 2003; 339-350. ( DOI )

  4. M Takeda, S Inenaga, H Bannai, A Shinohara, S Arikawa: Discovering most classificatory patterns for very expressive pattern classes DISCOVERY SCIENCE, PROCEEDINGS. 2003; 2843 486-493. ( DOI )

  5. Hideo Bannai, Shunsuke Inenaga, Ayumi Shinohara, Masayuki Takeda: Inferring Strings from Graphs and Arrays Mathematical Foundations of Computer Science 2003. 2003; 208-217. ( DOI )

  1. Hideo Bannai, Shunsuke Inenaga, Ayumi Shinohara, Masayuki Takeda, Satoru Miyano: A String Pattern Regression Algorithm and Its Application to Pattern Discovery in Long Introns Genome Informatics. 2002.12; 13 3-11. ( DOI )

  2. Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano: Fast algorithm for extracting multiple unordered short motifs using bit operations Information Sciences. 2002.10; 146 (1-4): 115-126. ( DOI )

  3. H. Bannai, Y. Tamada, O. Maruyama, K. Nakai, S. Miyano: Extensive feature detection of N-terminal protein sorting signals Bioinformatics. 2002.02; 18 (2): 298-305. ( DOI )

  4. Eijiro Sumii, Hideo Bannai: VM lambda: A Functional Calculusfor Scientific Discovery. Functional and Logic Programming, 6th International Symposium, FLOPS 2002, Aizu, Japan, September 15-17, 2002, Proceedings. 2002; 290-304. ( DOI )

  5. O Maruyama, H Bannai, Y Tamada, S Kuhara, S Miyano: Fast algorithm for extracting multiple unordered short motifs using bit operations PROCEEDINGS OF THE 6TH JOINT CONFERENCE ON INFORMATION SCIENCES. 2002; 1180-1185.

  6. S Inenaga, H Bannai, A Shmohara, M Takeda, S Arikawa: Discovering best variable-length-don't-care patterns DISCOVERY SCIENCE, PROCEEDINGS. 2002; 2534 86-97. ( DOI )

  7. S Inenaga, A Shinohara, M Takeda, H Bannai, S Arikawa: Space-economical construction of index structures for all suffixes of a string MATHEMATICAL FOUNDATIONS OF COMPUTER SCIENCE 2002. 2002; 2420 341-352. ( DOI )

  8. T Akutsu, H Bannai, S Miyano, S Ott: On the complexity of deriving position specific score matrices from examples COMBINATORIAL PATTERN MATCHING. 2002; 2373 168-177. ( DOI )

  1. Toru Nakayashiki, Kanae Ebihara, Hideo Bannai, Yoshikazu Nakamura: Yeast [PSI+] “Prions” that Are Crosstransmissible and Susceptible beyond a Species Barrier through a Quasi-Prion State Molecular Cell. 2001.06; 7 (6): 1121-1130. ( DOI )

  2. Masafumi Akahira, Kunihiko Takahashi: A higher order large-deviation approximation for the discrete distributions. Journal of the Japan Statistical Society. 2001; 31 (2): 257-267. ( DOI )

  3. Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano: HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process. Electron. Trans. Artif. Intell.. 2001; 5 (B): 73-83.

  4. Eijiro Sumii, Hideo Bannai: VM lambda: a Functional Calculus for Scientific Discovery. The Second Asian Workshop on Programming Languages and Systems, APLAS'01, Korea Advanced Institute of Science and Technology, Daejeon, Korea, December 17-18, 2001, Proceedings. 2001; 265-275.

  5. Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Kenta Nakai, Satoru Miyano: Views: Fundamental Building Blocks in the Process of Knowledge Discovery. Proceedings of the Fourteenth International Florida Artificial Intelligence Research Society Conference, May 21-23, 2001, Key West, Florida, USA. 2001; 233-238.

  6. Bannai, H., Tamada, Y., Maruyama, O., Miyano, S.: A system for supporting knowledge discovery from genomic data: software library Hypothesis Creator Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 2001; 46 (16 Suppl):

  7. Bannai, H., Tamada, Y., Maruyama, O., Miyano, S.: VML: A View Modeling Language for computational knowledge discovery Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2001; 2226 30-44. ( DOI )

  1. Tomohiro Yasuda, Hideo Bannai, Shuichi Onami, Satoru Miyano, Hiroaki Kitano: Towards Automatic Construction of Cell-Lineage of C. elegans from Nomarski DIC Microscope Images Genome Informatics. 1999.12; 10 144-154. ( DOI )

  2. Masafumi Akahira, Kunihiko Takahashi, Kei Takeuchi: The higher order large-deviation approximation for the distribution of the sum of independent discrete random variables. Communications in Statistics - Theory and Methods. 1999; 28 705-726. ( DOI )

  3. Kunihiko Takahashi: Randomized confidence intervals of a parameter for the negative binomial and logarithmic series distributions. Journal of the Japan Statistical Society. 1999; 29 (2): 201-212. ( DOI )

  4. H Bannai, S Miyano: A definition of discovery in terms of generalized descriptional complexity DISCOVERY SCIENCE, PROCEEDINGS. 1999; 1721 316-318.

  1. Masafumi Akahira, Hiroyuki Kashima, Kunihiko Takahashi: A generalized binomial distribution determined by a two-state Markov chain and a distribution by the Bayesian approach. Statistical Papers. 1997; 38 (1): 27-42. ( DOI )

  2. Masafumi Akahira, Kunihiko Takahashi, Kei Takeuchi: Randomized confidence intervals of a parameter for a family of discrete exponential type distributions. Communications in Statistics - Simulation and Computation. 1997; 26 (3): 1103-1128. ( DOI )

  1. 田栗正隆, 高橋邦彦, 小向翔, 伊藤ゆり, 服部聡, 船渡川伊久子, 篠崎智大, 山本倫生, 林賢一: 疫学分野での計量生物学の発展. 計量生物学. 2024.03; 44 (2): 129-200.

  1. Tanaka Hiromu, Namkoong Ho, Chubachi Shotaro, Irie Shinji, Uwamino Yoshifumi, Lee Ho, Azekawa Shuhei, Otake Shiro, Nakagawara Kensuke, Fukushima Takahiro, Watase Mayuko, Kusumoto Tatsuya, Masaki Katsunori, Kamata Hirofumi, Ishii Makoto, Okada Yukinori, Takano Tomomi, Imoto Seiya, Koike Ryuji, Kimura Akinori, Miyano Satoru, Ogawa Seishi, Kanai Takanori, Sato Taka-Aki, Fukunaga Koichi: Clinical characteristics of patients with COVID-19 harboring detectable intracellular SARS-CoV-2 RNA in peripheral blood cells INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES. 2023.10; 135 41-44. ( PubMed , DOI )

  2. Park Heewon, 宮野 悟: 【マルチオミクス　データ駆動時代の疾患研究　がん、老化、生活習慣病　最新のオミクス統合で挑む標的探索と病態解明】(第2章)データ解析・統合のインフォマティクス　抗がん剤の感受性・耐性を説明する最適な遺伝子ネットワーク解析 実験医学. 2023.09; 41 (15): 2472-2477. ( 医中誌 )

  3. Kusumoto Tatsuya, Chubachi Shotaro, Namkoong Ho, Tanaka Hiromu, Lee Ho, Azekawa Shuhei, Otake Shiro, Nakagawara Kensuke, Fukushima Takahiro, Morita Atsuho, Watase Mayuko, Sakurai Kaori, Asakura Takanori, Masaki Katsunori, Kamata Hirofumi, Ishii Makoto, Hasegawa Naoki, Harada Norihiro, Ueda Tetsuya, Ueda Soichiro, Ishiguro Takashi, Arimura Ken, Saito Fukuki, Yoshiyama Takashi, Nakano Yasushi, Mutoh Yoshikazu, Suzuki Yusuke, Edahiro Ryuya, Sano Hirohito, Sato Yasunori, Okada Yukinori, Koike Ryuji, Kitagawa Yuko, Tokunaga Katsushi, Kimura Akinori, Imoto Seiya, Miyano Satoru, Ogawa Seishi, Kanai Takanori, Fukunaga Koichi: Association between ABO blood group/genotype and COVID-19 in a Japanese population ANNALS OF HEMATOLOGY. 2023.08; 102 (11): 3239-3249. ( PubMed , DOI )

  4. Yoshimura Takuma, Chiyoda Tatsuyuki, Kamatani Takashi, Takahashi Mio, Sakai Kensuke, Yoshihama Tomoko, Yamagami Wataru, Tsunoda Tatsuhiko, Aoki Daisuke: Proteasome inhibitors are promising novel therapeutic candidates for ovarian clear cell carcinoma BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY. 2023.06; 130 44-45.

  5. Irie Misato, Kabata Hiroki, Sasahara Kotaro, Kurihara Momoko, Shirasaki Yoshitaka, Kamatani Takashi, Baba Rie, Matsusaka Masako, Koga Satoshi, Masaki Katsunori, Miyata Jun, Araki Yasutomo, Kikawada Toru, Kabe Yasuaki, Suematsu Makoto, Yamagishi Mai, Uemura Sotaro, Moro Kazuyo, Fukunaga Koichi: Annexin A1 is a cell-intrinsic metalloregulator of zinc in human ILC2s CELL REPORTS. 2023.06; 42 (6): 112610. ( PubMed , DOI )

  6. Hamba Yu, Kamatani Takashi, Miya Fuyuki, Boroevich Keith A., Tsunoda Tatsuhiko: Topologically associating domain underlies tissue specific expression of long intergenic non-coding RNAs ISCIENCE. 2023.05; 26 (5): 106640. ( PubMed , DOI )

  7. Ikeda Naoki, Kubota Hiroaki, Suzuki Risa, Morita Mitsuki, Yoshimura Ayana, Osada Yuya, Kishida Keigo, Kitamura Daiki, Iwata Ayaka, Yotsumoto Satoshi, Kurotaki Daisuke, Nishimura Koutarou, Nishiyama Akira, Tamura Tomohiko, Kamatani Takashi, Tsunoda Tatsuhiko, Murakawa Miyako, Asahina Yasuhiro, Hayashi Yoshihiro, Harada Hironori, Harada Yuka, Yokota Asumi, Hirai Hideyo, Seki Takao, Kuwahara Makoto, Yamashta Masakatsu, Shichino Shigeyuki, Tanaka Masato, Asano Kenichi: The early neutrophil-committed progenitors aberrantly differentiate into immunoregulatory monocytes during emergency myelopoiesis CELL REPORTS. 2023.03; 42 (3): 112165. ( PubMed , DOI )

  8. 高橋邦彦，大谷隆浩.: 災害・事故時における迅速対応統合プラットフォームの開発 地球環境. 2023; 28 (2): 187-194.

  1. Kameyama Naofumi, Sato Takashi, Arai Daisuke, Fujisawa Daisuke, Takeuchi Mari, Nakachi Ichiro, Kawada Ichiro, Yasuda Hiroyuki, Ikemura Shinnosuke, Terai Hideki, Nukaga Shigenari, Nakano Yasushi, Hirano Toshiyuki, Minematsu Naoto, Asakura Takanori, Kamatani Takashi, Tanaka Kyuto, Suzuki Shoji, Miyawaki Masayoshi, Naoki Katsuhiko, Fukunaga Koichi, Soejima Kenzo: Most Important Things and Associated Factors With Prioritizing Daily Life in Patients With Advanced Lung Cancer JCO ONCOLOGY PRACTICE. 2022.12; 18 (12): 851-+. ( PubMed , DOI )

  2. 浦田 智稀, ディプタラマ ヘンリアン, 吉仲 亮, 篠原 歩: 多様な設定の神経衰弱における戦略分析 ゲームプログラミングワークショップ2022論文集. 2022.11; 2022 35-42.

  3. Park Heewon, Imoto Seiya, Miyano Satoru: PredictiveNetwork: predictive gene network estimation with application to gastric cancer drug response-predictive network analysis BMC BIOINFORMATICS. 2022.08; 23 (1): ( DOI )

  4. 入江 美聡, 加畑 宏樹, 松坂 雅子, 馬塲 里英, 鎌谷 高志, 正木 克宜, 白崎 善隆, 福永 興壱: 気管支喘息(成人):病態生理 ヒト2型自然リンパ球における内因性活性化制御機構の解明 アレルギー. 2022.08; 71 (6-7): 832. ( 医中誌 )

  5. 入江 美聡, 加畑 宏樹, 松坂 雅子, 馬塲 里英, 鎌谷 高志, 正木 克宜, 白崎 善隆, 福永 興壱: 気管支喘息(成人):病態生理 ヒト2型自然リンパ球における内因性活性化制御機構の解明 アレルギー. 2022.08; 71 (6-7): 832. ( 医中誌 )

  6. 馬塲 里英, 加畑 宏樹, 入江 美聡, 渡辺 理沙, 鎌谷 高志, 白崎 善隆, 山岸 舞, 福永 興壱: 気管支喘息(成人):病態生理 喘息患者の末梢血由来2型自然リンパ球のシングルセル解析 アレルギー. 2022.08; 71 (6-7): 832. ( 医中誌 )

  7. 鎌谷 高志, 福永 興壱: 医師主体のAI解析を成功させるために 呼吸器疾患を中心に アレルギー. 2022.08; 71 (6-7): 696. ( 医中誌 )

  8. 宮野 悟: 【ビッグデータ解析に基づくがんの統合的理解と治療戦略】総論　ビッグデータが変えたがんの理解 Medical Science Digest. 2022.08; 48 (9): 403-405. ( 医中誌 )

  9. Matsuo Hitoshi, Kamatani Takashi, Hamba Yu, Boroevich Keith A., Tsunoda Tatsuhiko: Association between high immune activity and worse prognosis in uveal melanoma and low-grade glioma in TCGA transcriptomic data BMC GENOMICS. 2022.05; 23 (1): 351. ( PubMed , DOI )

  10. 神田 英一郎, 西田 優紀, 菅野 義彦, 勝川 史憲: SGLT2阻害薬は糖尿病性腎臓病患者のうちrapid decliner群に腎臓保護効果を示す 日本腎臓学会誌. 2022.05; 64 (3): 240. ( 医中誌 )

  11. 正木 克宜, 舘野 博喜, 亀山 直史, 鎌谷 高志, 福永 興壱: 本邦初の保険適用デジタル治療である禁煙治療スマホアプリの開発から社会実装まで 日本呼吸器学会誌. 2022.04; 11 (増刊): 131. ( 医中誌 )

  12. 正木 克宜, 舘野 博喜, 亀山 直史, 鎌谷 高志, 福永 興壱: 本邦初の保険適用デジタル治療である禁煙治療スマホアプリの開発から社会実装まで 日本呼吸器学会誌. 2022.04; 11 (増刊): 131. ( 医中誌 )

  13. 砂田 啓英也, 加畑 宏樹, 鎌谷 高志, 入江 美聡, 正木 克宜, 宮田 純, 福永 興壱: スタチンによるILC2を介した2型気道炎症の抑制機序の解明 日本呼吸器学会誌. 2022.04; 11 (増刊): 129. ( 医中誌 )

  14. 砂田 啓英也, 加畑 宏樹, 鎌谷 高志, 入江 美聡, 正木 克宜, 宮田 純, 福永 興壱: スタチンによるILC2を介した2型気道炎症の抑制機序の解明 日本呼吸器学会誌. 2022.04; 11 (増刊): 129. ( 医中誌 )

  15. 入江 美聡, 加畑 宏樹, 松坂 雅子, 馬塲 里英, 鎌谷 高志, 正木 克宜, 宮田 純, 白崎 善隆, 福永 興壱: LCI-Sを用いた2型自然リンパ球の新規制御機構の解明 日本呼吸器学会誌. 2022.04; 11 (増刊): 129. ( 医中誌 )

  16. 入江 美聡, 加畑 宏樹, 松坂 雅子, 馬塲 里英, 鎌谷 高志, 正木 克宜, 宮田 純, 白崎 善隆, 福永 興壱: LCI-Sを用いた2型自然リンパ球の新規制御機構の解明 日本呼吸器学会誌. 2022.04; 11 (増刊): 129. ( 医中誌 )

  17. Park Heewon, Yamaguchi Rui, Imoto Seiya, Miyano Satoru: Uncovering Molecular Mechanisms of Drug Resistance via Network-Constrained Common Structure Identification JOURNAL OF COMPUTATIONAL BIOLOGY. 2022.03; 29 (3): 257-275. ( DOI )

  18. 代謝フラックスの定量によるトランスオミクスネットワークの理解 2022;

  19. 内御堂亮, 長谷川嵩矩, 若林健二: 重症新型コロナウィルス肺炎死亡予測のためのICU時系列データ解析 日本集中治療医学会学術集会(Web). 2022; 49th

  1. 箱崎 恭平, 田中 伸之, 高松 公晴, 高橋 遼平, 三上 修治, 篠島 利明, 垣見 和宏, 鎌谷 高志, 宮 冬樹, 角田 達彦, 西原 広史, 水野 隆一, 大家 基嗣: 腎細胞癌におけるAXL/GAS6発現の臨床的意義とがん免疫ゲノミクス解析 日本泌尿器科学会総会. 2021.12; 109回 AOP03-06. ( 医中誌 )

  2. Hakozaki Kyohei, Tanaka Nobuyuki, Takamatsu Kimiharu, Takahashi Ryohei, Yasumizu Yota, Mikami Shuji, Shinojima Toshiaki, Kakimi Kazuhiro, Kamatani Takashi, Miya Fuyuki, Tsunoda Tatsuhiko, Aimono Eriko, Nishihara Hiroshi, Mizuno Ryuichi, Oya Mototsugu: Landscape of prognostic signatures and immunogenomics of the AXL/GAS6 axis in renal cell carcinoma BRITISH JOURNAL OF CANCER. 2021.11; 125 (11): 1533-1543. ( PubMed , DOI )

  3. 長谷川嵩矩, 安齋達彦, 高橋邦彦: AI・機械学習とデータサイエンス 体育の科学. 2021.11; 71 (11): 764-768.

  4. 長谷川嵩矩, 安齋達彦, 高橋邦彦: AI・機械学習とデータサイエンス 体育の科学. 2021.11; 71 (11): 764-768.

  5. Takamatsu Kimiharu, Tanaka Nobuyuki, Hakozaki Kyohei, Takahashi Ryohei, Teranishi Yu, Murakami Tetsushi, Kufukihara Ryohei, Niwa Naoya, Mikami Shuji, Shinojima Toshiaki, Sasaki Takashi, Sato Yusuke, Kume Haruki, Ogawa Seishi, Kakimi Kazuhiro, Kamatani Takashi, Miya Fuyuki, Tsunoda Tatsuhiko, Aimono Eriko, Nishihara Hiroshi, Sawada Kazuaki, Imamura Takeshi, Mizuno Ryuichi, Oya Mototsugu: Profiling the inhibitory receptors LAG-3, TIM-3, and TIGIT in renal cell carcinoma reveals malignancy NATURE COMMUNICATIONS. 2021.09; 12 (1): 5547. ( PubMed , DOI )

  6. 内御堂 亮, 長谷川 嵩矩, 三島 有華, 塩田 修玄, 丸山 史, 長島 道生, 山内 英雄, 鵜川 豊世武, 宮野 悟, 重光 秀信: 機械学習を用いた重症新型コロナウィルス肺炎における死亡予測モデル作成の試み 日本集中治療医学会雑誌. 2021.09; 28 (Suppl.2): 337. ( 医中誌 )

  7. 西田 優紀, 田中 茂穂: 【高齢者の低栄養予防・フレイル予防】高齢者におけるエネルギー必要量の考え方と課題 公衆衛生. 2021.08; 85 (8): 513-518. ( 医中誌 )

  8. 西田優紀, 田中茂穂: 高齢者におけるエネルギー必要量の考え方と課題 公衆衛生 . 2021.08; 85 (8):

  9. Ishioka Kota, Yasuda Hiroyuki, Hamamoto Junko, Terai Hideki, Emoto Katsura, Kim Tae-Jung, Hirose Shigemichi, Kamatani Takashi, Mimaki Sachiyo, Arai Daisuke, Ohgino Keiko, Tani Tetsuo, Masuzawa Keita, Manabe Tadashi, Shinozaki Taro, Mitsuishi Akifumi, Ebisudani Toshiki, Fukushima Takahiro, Ozaki Mari, Ikemura Shinnosuke, Kawada Ichiro, Naoki Katsuhiko, Nakamura Morio, Ohtsuka Takashi, Asamura Hisao, Tsuchihara Katsuya, Hayashi Yuichiro, Hegab Ahmed E., Kobayashi Susumu S., Kohno Takashi, Watanabe Hideo, Ornitz David M., Betsuyaku Tomoko, Soejima Kenzo, Fukunaga Koichi: Upregulation of FGF9 in Lung Adenocarcinoma Transdifferentiation to Small Cell Lung Cancer CANCER RESEARCH. 2021.07; 81 (14): 3916-3929. ( PubMed , DOI )

  10. 三澤 計治, 三島 英換, 長谷川 嵩矩, 大内 基司, 小島 要, 河合 洋介, 松尾 雅文, 安西 尚彦, 長崎 正朗: まれな変異に重点を置いた尿酸値の遺伝率の研究 痛風と尿酸・核酸. 2021.07; 45 (1): 23-30. ( 医中誌 )

  11. 宮野 悟: 【小児外科医が学ぶ人工知能(AI)・情報伝達技術(ICT)】ゲノム医療におけるAI技術活用 小児外科. 2021.04; 53 (4): 373-377. ( 医中誌 )

  12. 鈴木 惣一朗、伊東 聰、酒井 憲一郎、稲田 由江、三吉 郁夫、石川 裕、宮野 悟 : ヒト全ゲノム解析プログラム Genomon のスーパーコンピュータ「富岳」向け最適化と性能評価 情報処理学会研究報告ハイパフォーマンスコンピューティング(HPC) . 2021.03; 2021-HPC-178 (18): 1-9.

  13. 宮野 悟: メディカルデータサイエンスの現状 日本病理学会会誌. 2021.03; 110 (1): 133. ( 医中誌 )

  14. 高橋 邦彦: 保健医療のための空間データサイエンス. 医学のあゆみ. 2021.02; 276 (9): 843-848. ( 医中誌 )

  15. Park Heewon, 丸橋 弘治, 山口 類, 宮野 悟: 【新型データ駆動型サイエンスの起動】説明可能なAIによるパーソナルゲノム医療・予防の実現 医学のあゆみ. 2021.02; 276 (9): 849-853. ( 医中誌 )

  16. Nishiguchi Koji M., Miya Fuyuki, Mori Yuka, Fujita Kosuke, Akiyama Masato, Kamatani Takashi, Koyanagi Yoshito, Sato Kota, Takigawa Toru, Ueno Shinji, Tsugita Misato, Kunikata Hiroshi, Cisarova Katarina, Nishino Jo, Murakami Akira, Abe Toshiaki, Momozawa Yukihide, Terasaki Hiroko, Wada Yuko, Sonoda Koh-Hei, Rivolta Carlo, Tsunoda Tatsuhiko, Tsujikawa Motokazu, Ikeda Yasuhiro, Nakazawa Toru: A hypomorphic variant in EYS detected by genome-wide association study contributes toward retinitis pigmentosa COMMUNICATIONS BIOLOGY. 2021.01; 4 (1): 140. ( PubMed , DOI )

  17. 三森功士, 長山聡, 長谷川嵩矩, 新井田厚司, 小林雄太, 小林雄太, 増田隆明, 鈴木穣, 柴田龍弘: 大腸癌における転移巣形成への進化とctDNAで検出可能な変異の特徴 日本がん転移学会学術集会・総会プログラム抄録集. 2021; 30th

  1. 高橋 遼平, 田中 伸之, 宮 冬樹, 鎌谷 高志, 武田 利和, 松本 一宏, 森田 伸也, 小坂 威雄, 水野 隆一, 三上 修治, 垣見 和宏, 角田 達彦, 大家 基嗣: 透析患者に発生する腎細胞癌のOmics解析と腫瘍免疫微小環境の統合的理解 日本泌尿器科学会総会. 2020.12; 108回 805. ( 医中誌 )

  2. 藤井 陽一, 佐藤 悠佑, 鈴木 啓道, 吉田 健一, 白石 友一, 西松 寛明, 岡根谷 利一, 牧島 秀樹, 川合 剛人, 中川 徹, 宮野 悟, 小川 誠司, 久米 春喜: 上部尿路上皮癌の変異に基づく分子病型分類とその臨床応用の可能性 日本泌尿器科学会総会. 2020.12; 108回 464. ( 医中誌 )

  3. 藤井 陽一, 佐藤 悠佑, 鈴木 啓道, 吉田 健一, 白石 友一, 西松 寛明, 岡根谷 利一, 牧島 秀樹, 川合 剛人, 中川 徹, 宮野 悟, 小川 誠司, 久米 春喜: 上部尿路上皮癌の変異に基づく分子病型分類 日本泌尿器科学会総会. 2020.12; 108回 884. ( 医中誌 )

  4. 三澤 計治, 長谷川 嵩矩, 三島 英換, Jutabha Promsuk, 大内 基司, 小島 要, 河合 洋介, 長崎 正朗, 安西 尚彦: 尿酸値の失われた遺伝率は、レアバリアントがかなりの部分を説明する 痛風と尿酸・核酸. 2020.07; 44 (1): 86. ( 医中誌 )

  5. 宮野 悟: 【ゲノム革命-予防・医療のイノベーション】ゲノム革命の足跡と予防・医療の近未来 公衆衛生. 2020.04; 84 (4): 214-219. ( 医中誌 )

  6. 宮野 悟: 【小児血液・腫瘍疾患の最前線】診療のトピックス　人工知能と白血病の診断・治療の展望 小児科診療. 2020.04; 83 (4): 479-483. ( 医中誌 )

  7. 三澤 計治, 長谷川 嵩矩, 三島 英換, Jutabha Promsuk, 大内 基司, 小島 要, 河合 洋介, 長崎 正朗, 安西 尚彦: 尿酸値の失われた遺伝率は、レアバリアントがかなりの部分を説明する 日本痛風・核酸代謝学会総会プログラム抄録集. 2020.01; 53回 66. ( 医中誌 )

  8. Kameyama N., Masaki K., Kamatani T., Fukunaga K., Tateno H.: The Factors Associated with Successful Induction of Smoking Cessation Using a Novel Smartphone Application System AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. 2020; 201

  1. Kuwae M., Matsusaka M., Yamagishi M., Koga S., Miyata K., Kamatani T., Tanaka Y., Araki Y., Kikawada T., Moro K., Moro S., Shirasaki Y., Fukunaga K.: Gene Expression Analysis of Activated Human ILC2s Based on "Single Cell Secretion Activity Analysis System (LCI-S)" AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. 2019; 199

  2. 鎌谷高志: 医学、医療におけるAIのインパクト 日本産婦人科医会報. 2019; (８・９合併):

  1. Hasegawa Takanori, Kojima Kaname, Kawai Yosuke, Nagasaki Masao: Time-Series Filtering for Replicated Observations via a Kernel Approximate Bayesian Computation IEEE TRANSACTIONS ON SIGNAL PROCESSING. 2018.12; 66 (23): 6148-6161. ( DOI )

  2. PCAWGデータを用いた予後バイオマーカーの網羅的探索(Comprehensive Search for Prognostic Biomarkers using PCAWG Data) 2018.09; 77回 358. ( 医中誌 )

  3. 肝臓がんにおける免疫抑制機構のゲノム解析(Genomic insights into immune suppression in liver cancer) 2018.09; 77回 906. ( 医中誌 )

  4. 藤田 征志, 井元 清哉, 山口 類, 長谷川 嵩矩, 林 周斗, 宮野 悟, 松原 長秀, 冨田 尚裕, 山上 裕機, 茶山 一彰, 中川 英刀: 肝臓がんおよび大腸がんのゲノム・トランスクリプトーム解析による腫瘍免疫微小環境の特性評価 日本がん免疫学会総会プログラム・抄録集. 2018.07; 22回 152. ( 医中誌 )

  5. 三澤計治, 三澤計治, 三島英換, 大内基司, 長谷川嵩矩, 小島要, 小島要, 河合洋介, 長崎正朗, 長崎正朗, 安西尚彦, 安西尚彦, 阿部高明, 山本雅之, 山本雅之: レアバリアントが尿酸値の失われた遺伝率のかなりの割合を説明する 日本人類遺伝学会大会プログラム・抄録集. 2018; 63rd

  6. 長谷川嵩矩, 新井田厚司, 山口類, 井元清哉: 状態空間モデルを用いた時系列ヘルスケアデータの解析と応用 統計関連学会連合大会講演報告集. 2018; 2018

  7. 山内貴史, 梅崎重夫, 平岡伸隆, 高橋邦彦, 須賀万智, 柳澤裕之: 過重労働・過労と業務上の事故. 産業医学ジャーナル. 2018; 41 (5): 124-127. ( 医中誌 )

  8. 高橋邦彦: 薬剤使用の研究における統計的指標. 臨床精神医学. 2018; 47 26-30. ( 医中誌 )

  9. 遅野井 健, 志岐 甲介, 石田 真大, 唯保 祐介, 安齋 達彦, 宮本 悠希, 生島 一平: 日本人健康成人男性を対象としたエンパグリフロジン・リナグリプチン配合錠のバイオアベイラビリティに対する食事の影響　ランダム化、単回投与、2群クロスオーバー試験 薬理と治療. 2018; 46 (3): 343-353. ( 医中誌 )

  10. 立森 久照, 高橋 邦彦, 加藤 直広: 空間疫学の手法により可視化された情報は川崎市の地域包括ケアでどのように活用できるのか 精神保健政策研究. 2018; 26 10-15. ( 医中誌 )

  1. 鎌谷 高志, 福永 興壱: 【重症喘息-基礎から臨床まで-】 重症喘息の診断基準と病型分類 最新医学. 2017.07; 72 (7): 943-949. ( 医中誌 )

  2. 長谷川嵩矩, 新井田厚司, 山口類, 井元清哉: L1正則化付き状態空間モデルを用いた健診結果の将来予測 統計関連学会連合大会講演報告集. 2017; 2017

  1. 竹島正, 立森久照, 高橋邦彦, 山之内芳雄: 精神保健医療福祉の改革ビジョンの成果と今後の課題. 公衆衛生. 2016; 80 (11): 790-796. ( DOI , 医中誌 )

  2. 竹島正, 立森久照, 高橋邦彦: 認知症施策とこれからの精神保健医療福祉のあり方. 老年精神医学雑誌. 2016; 27 (7): 777-782. ( 医中誌 )

  3. 降旗 謙一, 中道 昇, 関 哲郎, 唯保 祐介, 安齋 達彦, 黒木 大介, 西村 誠一郎, 檜垣 實男: 日本人健康成人男性を対象としたテルミサルタン80mg/アムロジピン5mg/ヒドロクロロチアジド12.5mg配合剤の生物学的同等性試験および食事の影響試験 薬理と治療. 2016; 44 (5): 689-702. ( 医中誌 )

  1. 大腸菌による有用物質生産に向けた 3 重反応破壊の in silico スクリーニング (2014 生物工学論文賞) 2015;

  1. Diptarama, Kazuyuki Narisawa, Shinohara Ayumi: 一般化三並べの拡張: 一手 p 石 情報処理学会論文誌. 2014; 55 (11): 2344.

  2. 荻野大助, 高橋邦彦, 佐藤元: 臨床研究・治験, 医療情報提供や情報検索ウェブサイト運営に関わる日欧米の現状と課題. Clinical Research Professionals. 2014; 43 (8): 50-57. ( 医中誌 )

  3. 藤井仁, 野口都美, 荻野大助, 高橋邦彦, 佐藤元: 臨床試験段階の医薬, 一般的な医薬の情報源についての観察研究―患者団体, 通院患者, 一般住民の差異. 臨床医薬. 2014; 30 (1): 39-46. ( 医中誌 )

  4. 高橋邦彦, 和泉志津恵, 竹内文乃: 位置情報を用いた疫学研究とその統計的方法. 統計数理. 2014; 62 (1): 3-22.

  1. 山口一郎, 寺田宙, 欅田尚樹, 高橋邦彦: 東京電力福島第一原子力発電所事故に起因した食品摂取由来の線量の推計. 保健医療科学. 2013; 62 (2): 138-143. ( 医中誌 )

  1. 金谷泰宏, 高橋邦彦, 眞屋朋和, 市川学: 健康危機情報の可視化と危機対応. 保健医療科学. 2012; 61 (4): 331-337. ( 医中誌 )

  2. 高橋邦彦，武村真治，長谷川学，金谷泰宏，齋藤大蔵，阪本敏久: わが国における救急蘇生統計を用いた冬季の心肺機能停止傷病者救急搬送件数の時間的集積性の検出. 日本臨床救急医学会雑誌. 2012; 15 (5): 652-661. ( 医中誌 )

  3. 野田 寿恵, 安齋 達彦, 杉山 直也, 平田 豊明, 伊藤 弘人: 精神保健福祉資料(630調査)を用いた隔離・身体拘束施行者数の分析 精神医学. 2012; 54 (3): 317-323. ( DOI , 医中誌 )

  1. 高橋邦彦, 飛田英祐, 山岡和枝, 丹後俊郎: ベイズ推定の医療費地域差指数への適用. 日本公衆衛生雑誌. 2010; 57 (1): 17-26. ( DOI )

  1. 大坪浩一, 山岡和枝, 横山徹爾, 高橋邦彦, 西川正子, 丹後俊郎: 標準化死亡比の経験的ベイズ推定量に基づく医療資源と死亡との関連ー全国の市区町村を対象としてー 日本公衆衛生雑誌. 2009; 56 101-110. ( DOI , 医中誌 )

  1. 高橋邦彦, 丹後俊郎: 疾病集積性の検定を用いた症候サーベイランス解析. 保健医療科学. 2008; 57 (2): 122-129. ( 医中誌 )

  2. 郡山一明, 片岡裕介, 竹中ゆかり, 浅見泰司, 高橋邦彦, 丹後俊郎 : 健康危機管理と小学校欠席状況サーベイランス. 保健医療科学. 2008; 57 (2): 130-136. ( 医中誌 )

  3. 相田潤, 森田学, 安藤雄一, 丹後俊郎, 高橋邦彦, 青山旬, 小坂健: 歯科疾患の地域差の検討. 保健医療科学. 2008; 57 (2): 92-98. ( 医中誌 )

  4. 高橋邦彦, 横山徹爾, 丹後俊郎: 疾病地図から疾病集積性へ. 保健医療科学. 2008; 57 (2): 86-92. ( 医中誌 )

  1. 大坪浩一, 山岡和枝, 横山徹爾, 高橋邦彦, 丹後俊郎: 標準化死亡比の経験的ベイズ推定量による医療資源の死亡に及ぼす影響に関する研究　―福岡県における事例―. 日本公衆衛生雑誌. 2004; 51 (5): 347-356. ( DOI , 医中誌 )

  1. Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity 2024.03; 27 (3): 109121. ( DOI )

  1. DNA hypomethylation characterizes genes encoding tissue-dominant functional proteins in liver and skeletal muscle 2023.11; 13 (1): ( DOI )

  1. Upregulation of IL-4 receptor signaling pathway in circulating ILC2s from asthma patients 2022.11; 1 (4): 299-304. ( DOI )

  1. 長谷川嵩矩, 新井田厚司, 山口類, 井元清哉: 機械学習を用いた時系列ヘルスケアデータの解析と応用 統計関連学会連合大会講演報告集. 2019; 2019

  2. 勝川史憲, 森野勝太郎, 卯木智, 前川聡, 近藤慶子, 西田香, 大井彰子, 栗原美香, 佐々木雅也, 中江悟司, 西田優紀, 山田陽介, 田中茂穂, 海老根直之, 佐々木敏: 養護老人ホーム居住者のCOPDと糖尿病の患者のエネルギーバランスに関する研究 糖尿病(Web). 2019; 62 (Suppl):

  3. Cyber-Enhanced Rescue Canine. 2019; 143-193. ( DOI )

  1. 宮澤伊都子, 森野勝太郎, 布施恵子, 近藤慶子, 大井彰子, 西田香, 栗原美香, 安原祥子, 中西直子, 西田優紀, 中江悟司, 山田陽介, 田中茂穂, 海老根直之, 佐々木敏, 勝川史憲, 佐々木雅也, 卯木智, 前川聡: 糖尿病患者の身体活動量の特徴と体組成,体格との関係:日本人の食事摂取基準2020年版に向けて 糖尿病(Web). 2018; 61 (Suppl):

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