Personnel Information

写真a

YAMANE Mariko


Job title

Assistant Professor
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Graduating School 【 display / non-display 】

  • Tokyo University of Agriculture, 2007.03, Advanced a year

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Graduate School 【 display / non-display 】

  • Tottori University, Master's Course, 2009.03, Completed

  • Tottori University, Doctor's Course, 2012.03, Accomplished credits for doctoral program

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Campus Career 【 display / non-display 】

  • 2021.04
    -
    2022.04
    Tokyo Medical and Dental University， Medical Research Institute， Medical Genomics， Department of Functional Genome Informatics， Assistant Professor
  • 2022.05
    -
    Now
    Tokyo Medical and Dental University， Medical Research Institute， Division of Biological Data Science， Department of Functional Genome Informatics， Assistant Professor
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External Career 【 display / non-display 】

  • 2007.09
    -
    2012.03
    , Visiting Lecturer
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Research Areas 【 display / non-display 】

  • Genome biology

  • Cell biology

  • Molecular biology

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Published Papers & Misc 【 display / non-display 】

  1. Morino-Koga S, Tsuruda M, Zhao X, Oshiro S, Yokomizo T, Yamane M, Tanigawa S, Miike K, Usuki S, Yasunaga KI, Nishinakamura R, Suda T, Ogawa M. Transition of signal requirement in hematopoietic stem cell development from hemogenic endothelial cells. Proceedings of the National Academy of Sciences of the United States of America. 2024.07; 121 (31): e2404193121. ( PubMed, DOI )

  2. Mwalilino L, Yamane M, Ishiguro KI, Usuki S, Endoh M, Niwa H. The role of Zfp352 in the regulation of transient expression of 2-cell specific genes in mouse embryonic stem cells. Genes to cells : devoted to molecular & cellular mechanisms. 2023.12; 28 (12): 831-844. ( PubMed, DOI )

  3. Sano H, Nakamura A, Yamane M, Niwa H, Nishimura T, Araki K, Takemoto K, Ishiguro KI, Aoki H, Kato Y, Kojima M. The polyol pathway is an evolutionarily conserved system for sensing glucose uptake. PLoS biology. 2022.06; 20 (6): e3001678. ( PubMed, DOI )

  4. Naganuma H, Miike K, Ohmori T, Tanigawa S, Ichikawa T, Yamane M, Eto M, Niwa H, Kobayashi A, Nishinakamura R. Molecular detection of maturation stages in the developing kidney. Developmental biology. 2021.02; 470 62-73. ( PubMed, DOI )

  5. Takemoto K, Tani N, Takada-Horisawa Y, Fujimura S, Tanno N, Yamane M, Okamura K, Sugimoto M, Araki K, Ishiguro KI. Meiosis-Specific C19orf57/4930432K21Rik/BRME1 Modulates Localization of RAD51 and DMC1 to DSBs in Mouse Meiotic Recombination. Cell reports. 2020.05; 31 (8): 107686. ( PubMed, DOI )

  6. Ishiguro KI, Matsuura K, Tani N, Takeda N, Usuki S, Yamane M, Sugimoto M, Fujimura S, Hosokawa M, Chuma S, Ko MSH, Araki K, Niwa H. MEIOSIN Directs the Switch from Mitosis to Meiosis in Mammalian Germ Cells. Developmental cell. 2020.02; 52 (4): 429-445.e10. ( PubMed, DOI )

  7. Nasser H, Adhikary P, Abdel-Daim A, Noyori O, Panaampon J, Kariya R, Okada S, Ma W, Baba M, Takizawa H, Yamane M, Niwa H, Suzu S. Establishment of bone marrow-derived M-CSF receptor-dependent self-renewing macrophages. Cell death discovery. 2020; 6 63. ( PubMed, DOI )

  8. Yamane M, Ohtsuka S, Matsuura K, Nakamura A, Niwa H. Overlapping functions of Krüppel-like factor family members: targeting multiple transcription factors to maintain the naïve pluripotency of mouse embryonic stem cells. Development (Cambridge, England). 2018.05; 145 (10): ( PubMed, DOI )

  9. Mariko Yamane, Setsuko Fujii, Satoshi Ohtsuka, Hitoshi Niwa. Zscan10 is dispensable for maintenance of pluripotency in mouse embryonic stem cells BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2015.12; 468 (4): 826-831. ( PubMed, DOI )

  10. Masaki Kinoshita, Daisuke Shimosato, Mariko Yamane, Hitoshi Niwa. Sox7 is dispensable for primitive endoderm differentiation from mouse ES cells BMC DEVELOPMENTAL BIOLOGY. 2015.10; 15 37. ( PubMed, DOI )

  11. Setsuko Fujii, Satomi Nishikawa-Torikai, Yoko Futatsugi, Yayoi Toyooka, Mariko Yamane, Satoshi Ohtsuka, Hitoshi Niwa. Nr0b1 is a negative regulator of Zscan4c in mouse embryonic stem cells SCIENTIFIC REPORTS. 2015.03; 5 9146. ( PubMed, DOI )

  12. Shunsuke Ito, Mariko Yamane, Satoshi Ohtsuka, Hitoshi Niwa. The C-terminal region of Xpc is dispensable for the transcriptional activity of Oct3/4 in mouse embryonic stem cells FEBS LETTERS. 2014.04; 588 (7): 1128-1135. ( PubMed, DOI )

  13. Masaki Shigeta, Satoshi Ohtsuka, Satomi Nishikawa-Torikai, Mariko Yamane, Setsuko Fujii, Kazuhiro Murakami, Hitoshi Niwa. Maintenance of pluripotency in mouse ES cells without Trp53 Scientific Reports. 2013.10; 3 2944. ( PubMed, DOI )

  14. Tomoko Nakanishi, Rumiko Saito, Makoto Taniguchi, Haruka Oda, Atsumi Soma, Mayu Yasunaga, Mariko Yamane, Kenzo Sato. In Vivo Determination of Vitamin D Function Using Transgenic Mice Carrying a Human Osteocalcin Luciferase Reporter Gene BIOMED RESEARCH INTERNATIONAL. 2013; 2013 895706. ( PubMed, DOI )

  15. Naohiro Hori, Mariko Yamane, Kaori Kouno, Kenzo Sato. Induction of DNA Demethylation Depending on Two Sets of Sox2 and Adjacent Oct3/4 Binding Sites (Sox-Oct Motifs) within the Mouse H19/Insulin-like Growth Factor 2 (Igf2) Imprinted Control Region JOURNAL OF BIOLOGICAL CHEMISTRY. 2012.12; 287 (52): 44006-44016. ( PubMed, DOI )

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Conference Activities & Talks 【 display / non-display 】

  1. Mariko Yamane 他. Decoding the Intricate Signaling Orchestration in Early Human Development: A Temporally Resolved Transcriptomic Approach with Comprehensive Chemical Pertuabations. 57th JSDB annual meeting 2024.06.22 京都みやこめっせ

  2. Mariko Yamane 他. Atlas-class transcriptome analysis of human iPS cell differentiation by using bulk-Quartz-seq2 in a single small research team.. 第１８回生命医科学研究所ネットワーク国際シンポジウム 2023.10.06 東京医科歯科大学

  3. 山根 万里子, 笹川 洋平, 岩山 佳美, 的場 綾子, 二階堂 愛 . 少人数の単一研究室によるbulk-Quartz-Seq2を用いたヒトiPS細胞の分化誘導における超多検体トランスクリプトーム解析. 第44回日本分子生物学会年会 2021.12.02 パシフィコ横浜

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