Published Papers & Misc - NIKAIDO Itoshi

Division display  41 - 55 of about 55 ／  All the affair displays >>

  1. Yohei Sasagawa, Itoshi Nikaido, Tetsutaro Hayashi, Hiroki Danno, Kenichiro D. Uno, Takeshi Imai, Hiroki R Ueda. Quartz-Seq: A highly reproducible and sensitive single-cell RNA sequencing method, reveals nongenetic gene-expression heterogeneity Genome Biology. 2013.04; 14 (4): R31. ( PubMed, DOI )

  2. Nobuo Yoshimoto, Akiko Kida, Xu Jie, Masaya Kurokawa, Masumi Iijima, Tomoaki Niimi, Andres D. Maturana, Itoshi Nikaido, Hiroki R. Ueda, Kenji Tatematsu, Katsuyuki Tanizawa, Akihiko Kondo, Ikuo Fujii, Shun'ichi Kuroda. An automated system for high-throughput single cell-based breeding SCIENTIFIC REPORTS. 2013.02; 3 1191. ( PubMed, DOI )

  3. Yuko Okamura-Oho, Kazuro Shimokawa, Satoko Takemoto, Asami Hirakiyama, Sakiko Nakamura, Yuki Tsujimura, Masaomi Nishimura, Takeya Kasukawa, Koh-hei Masumoto, Itoshi Nikaido, Yasufumi Shigeyoshi, Hiroki R. Ueda, Gang Song, James Gee, Ryutaro Himeno, Hideo Yokota. Transcriptome Tomography for Brain Analysis in the Web-Accessible Anatomical Space PLOS ONE. 2012.09; 7 (9): e45373. ( PubMed, DOI )

  4. Takeya Kasukawa, Koh-hei Masumoto, Itoshi Nikaido, Mamoru Nagano, Kenichiro D. Uno, Kaori Tsujino, Carina Hanashima, Yasufumi Shigeyoshi, Hiroki R. Ueda. Quantitative Expression Profile of Distinct Functional Regions in the Adult Mouse Brain PLOS ONE. 2011.08; 6 (8): e23228. ( PubMed, DOI )

  5. Yoshimi Tokuzawa, Ken Yagi, Yzumi Yamashita, Yutaka Nakachi, Itoshi Nikaido, Hidemasa Bono, Yuichi Ninomiya, Yukiko Kanesaki-Yatsuka, Masumi Akita, Hiromi Motegi, Shigeharu Wakana, Tetsuo Noda, Fred Sablitzky, Shigeki Arai, Riki Kurokawa, Toru Fukuda, Takenobu Katagiri, Christian Schoenbach, Tatsuo Suda, Yosuke Mizuno, Yasushi Okazaki. Id4, a New Candidate Gene for Senile Osteoporosis, Acts as a Molecular Switch Promoting Osteoblast Differentiation PLOS GENETICS. 2010.07; 6 (7): e1001019. ( PubMed, DOI )

  6. Keiichiro Suzuki, Fumi Ohbayashi, Itoshi Nikaido, Akihiko Okuda, Haruyoshi Takaki, Yasushi Okazaki, Kohnosuke Mitani. Integration of exogenous DNA into mouse embryonic stem cell chromosomes shows preference into genes and frequent modification at junctions CHROMOSOME RESEARCH. 2010.02; 18 (2): 191-201. ( PubMed, DOI )

  7. Yutaka Nakachi, Ken Yagi, Itoshi Nikaido, Hidemasa Bono, Mio Tonouchi, Christian Schonbach, Yasushi Okazaki. Identification of novel PPAR gamma target genes by integrated analysis of ChIP-on-chip and microarray expression data during adipocyte differentiation BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2008.07; 372 (2): 362-366. ( DOI )

  8. Nikaido, I, C Saito, A Wakamoto, Y Tomaru, T Arakawa, Y Hayashizaki, Y Okazaki. EICO (Expression-based Imprint Candidate Organizer): finding disease-related imprinted genes NUCLEIC ACIDS RESEARCH. 2004.01; 32 D548-D551. ( PubMed, DOI )

  9. H Bono, K Yagi, T Kasukawa, Nikaido, I, N Tominaga, R Miki, Y Mizuno, Y Tomaru, H Goto, H Nitanda, D Shimizu, H Makino, T Morita, J Fujiyama, T Sakai, T Shimoji, DA Hume, Y Hayashizaki, Y Okazaki. Systematic expression profiling of the mouse transcriptome using RIKEN cDNA microarrays GENOME RESEARCH. 2003.06; 13 (6B): 1318-1323. ( PubMed, DOI )

  10. L Nikaido, C Saito, Y Mizuno, M Meguro, H Bono, M Kadomura, T Kono, GA Morris, PA Lyons, M Oshimura, Y Hayashizaki, Y Okazaki. Discovery of imprinted transcripts in the mouse transcriptome using large-scale expression profiling GENOME RESEARCH. 2003.06; 13 (6B): 1402-1409. ( PubMed, DOI )

  11. Hidemasa Bono, Itoshi Nikaido, Takeya Kasukawa, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Yasushi Okazaki. Comprehensive analysis of the mouse metabolone based on the transcriptome Genome Research. 2003.06; 13 (6 B): 1345-1349. ( PubMed, DOI )

  12. Y Okazaki, M Furuno, T Kasukawa, J Adachi, H Bono, S Kondo, Nikaido, I, N Osato, R Saito, H Suzuki, Yamanaka, I, H Kiyosawa, K Yagi, Y Tomaru, Y Hasegawa, A Nogami, C Schonbach, T Gojobori, R Baldarelli, DP Hill, C Bult, DA Hume, J Quackenbush, LM Schriml, A Kanapin, H Matsuda, S Batalov, KW Beisel, JA Blake, D Bradt, Brusic, V, C Chothia, LE Corbani, S Cousins, E Dalla, TA Dragani, CF Fletcher, A Forrest, KS Frazer, T Gaasterland, M Gariboldi, C Gissi, A Godzik, J Gough, S Grimmond, S Gustincich, N Hirokawa, IJ Jackson, ED Jarvis, A Kanai, H Kawaji, Y Kawasawa, RM Kedzierski, BL King, A Konagaya, Kurochkin, IV, Y Lee, B Lenhard, PA Lyons, DR Maglott, L Maltais, L Marchionni, L McKenzie, H Miki, T Nagashima, K Numata, T Okido, WJ Pavan, G Pertea, G Pesole, N Petrovsky, R Pillai, JU Pontius, D Qi, S Ramachandran, T Ravasi, JC Reed, DJ Reed, J Reid, BZ Ring, M Ringwald, A Sandelin, C Schneider, CAM Semple, M Setou, K Shimada, R Sultana, Y Takenaka, MS Taylor, RD Teasdale, M Tomita, R Verardo, L Wagner, C Wahlestedt, Y Wang, Y Watanabe, C Wells, LG Wilming, A Wynshaw-Boris, M Yanagisawa, Yang, I, L Yang, Z Yuan, M Zavolan, Y Zhu, A Zimmer, P Carninci, N Hayatsu, T Hirozane-Kishikawa, H Konno, M Nakamura, N Sakazume, K Sato, T Shiraki, K Waki, J Kawai, K Aizawa, T Arakawa, S Fukuda, A Hara, W Hashizume, K Imotani, Y Ishii, M Itoh, Kagawa, I, A Miyazaki, K Sakai, D Sasaki, K Shibata, A Shinagawa, A Yasunishi, M Yoshino, R Waterston, ES Lander, J Rogers, E Birney, Y Hayashizaki. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs NATURE. 2002.12; 420 (6915): 563-573. ( PubMed, DOI )

  13. Y Mizuno, Y Sotomaru, Y Katsuzawa, T Kono, M Meguro, M Oshimura, J Kawai, Y Tomaru, H Kiyosawa, Nikaido, I, H Amanuma, Y Hayashizaki, Y Okazaki. Asb4, Ata3, and Dcn are novel imprinted genes identified by high-throughput screening using RIKEN cDNA microarray BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2002.02; 290 (5): 1499-1505. ( PubMed, DOI )

  14. J Kawai, A Shinagawa, K Shibata, M Yoshino, M Itoh, Y Ishii, T Arakawa, A Hara, Y Fukunishi, H Konno, J Adachi, S Fukuda, K Aizawa, M Izawa, K Nishi, H Kiyosawa, S Kondo, Yamanaka, I, T Saito, Y Okazaki, T Gojobori, H Bono, T Kasukawa, R Saito, K Kadota, H Matsuda, M Ashburner, S Batalov, T Casavant, W Fleischmann, T Gaasterland, C Gissi, B King, H Kochiwa, P Kuehl, S Lewis, Y Matsuo, Nikaido, I, G Pesole, J Quackenbush, LM Schriml, F Staubli, R Suzuki, M Tomita, L Wagner, T Washio, K Sakai, T Okido, M Furuno, H Aono, R Baldarelli, G Barsh, J Blake, D Boffelli, N Bojunga, P Carninci, MF de Bonaldo, MJ Brownstein, C Bult, C Fletcher, M Fujita, M Gariboldi, S Gustincich, D Hill, M Hofmann, DA Hume, M Kamiya, NH Lee, P Lyons, L Marchionni, J Mashima, J Mazzarelli, P Mombaerts, P Nordone, B Ring, M Ringwald, Rodriguez, I, N Sakamoto, H Sasaki, K Sato, C Schonbach, T Seya, Y Shibata, KF Storch, H Suzuki, K Toyo-oka, KH Wang, C Weitz, C Whittaker, L Wilming, A Wynshaw-Boris, K Yoshida, Y Hasegawa, H Kawaji, S Kohtsuki, Y Hayashizaki. Functional annotation of a full-length mouse cDNA collection NATURE. 2001.02; 409 (6821): 685-690. ( PubMed, DOI )

  15. Nikaido, I, E Asamizu, M Nakajima, Y Nakamura, N Saga, S Tabata. Generation of 10,154 expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis DNA RESEARCH. 2000.06; 7 (3): 223-227. ( PubMed, DOI )

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