Personnel Information

写真a

TSUNODA TATSUHIKO


Job title

Professor

Graduating School 【 display / non-display

  • The University of Tokyo, Faculty of Science, Graduated

Graduate School 【 display / non-display

  • The University of Tokyo, Graduate School, Division of Science, Master's Course, Completed

  • The University of Tokyo, Graduate School, Division of Engineering, Doctor's Course, Completed

Degree 【 display / non-display

  • Ph.D.(Medicine)

  • Ph.D.(Engineering)

Campus Career 【 display / non-display

  • 2015.07
    -
    Now
    Tokyo Medical and Dental University, Medical Research Institute, Medical Genomics, Medical Science Mathematics, Professor
  • 2015.12
    -
    2018.03
    Tokyo Medical and Dental University, Graduate School of Medical and Dental Sciences, Life Science and Technology, Life Science and Technology, Medical Science Mathematics, Professor
  • 2018.04
    -
    Now
    Tokyo Medical and Dental University, Graduate School of Medical and Dental Sciences, Medical and Dental Science and Technology, -, Professor

External Career 【 display / non-display

  • 2019.04
    -
    Now
    The University of Tokyo, Medical Science Mathematics, Department of Biological Sciences, Graduate School of Science, Professor
 

Published Papers & Misc 【 display / non-display

  • Shiu Kumar, Tatsuhiko Tsunoda, Alok Sharma. SPECTRA: a tool for enhanced brain wave signal recognition. BMC Bioinformatics. 2021.06; 22 (Suppl 6): 195. ( PubMed, DOI )

  • Jun Hosoe, Yuki Kawashima Sonoyama, Fuyuki Miya, Hiroko Kadowaki, Ken Suzuki, Takashi Kato, Fumiko Matsuzawa, Sei-Ichi Aikawa, Yukinori Okada, Tatsuhiko Tsunoda, Keiichi Hanaki, Susumu Kanzaki, Nobuhiro Shojima, Toshimasa Yamauchi, Takashi Kadowaki. Genotype-Structure-Phenotype Correlations in Disease-Associated IGF1R Variants and Similarities to Those in INSR Variants. Diabetes. 2021.06; ( PubMed, DOI )

  • Nobuhiko Okamoto, Fuyuki Miya, Yukihiro Kitai, Tatsuhiko Tsunoda, Mitsuhiro Kato, Shinji Saitoh, Yonehiro Kanemura, Kenjiro Kosaki. Homozygous ADCY5 mutation causes early-onset movement disorder with severe intellectual disability. Neurol Sci. 2021.03; ( PubMed, DOI )

  • Satoko Miyatake, Mitsuhiro Kato, Takuma Kumamoto, Tomonori Hirose, Eriko Koshimizu, Takaaki Matsui, Hideyuki Takeuchi, Hiroshi Doi, Keisuke Hamada, Mitsuko Nakashima, Kazunori Sasaki, Akio Yamashita, Atsushi Takata, Kohei Hamanaka, Mai Satoh, Takabumi Miyama, Yuri Sonoda, Momoko Sasazuki, Hiroyuki Torisu, Toshiro Hara, Yasunari Sakai, Yushi Noguchi, Mazumi Miura, Yoko Nishimura, Kazuyuki Nakamura, Hideyuki Asai, Nodoka Hinokuma, Fuyuki Miya, Tatsuhiko Tsunoda, Masami Togawa, Yukihiro Ikeda, Nobusuke Kimura, Kaoru Amemiya, Asako Horino, Masataka Fukuoka, Hiroko Ikeda, Goni Merhav, Nina Ekhilevitch, Masaki Miura, Takeshi Mizuguchi, Noriko Miyake, Atsushi Suzuki, Shouichi Ohga, Hirotomo Saitsu, Hidehisa Takahashi, Fumiaki Tanaka, Kazuhiro Ogata, Chiaki Ohtaka-Maruyama, Naomichi Matsumoto. De novo ATP1A3 variants cause polymicrogyria. Sci Adv. 2021.03; 7 (13): ( PubMed, DOI )

  • Ran DU, Shiqi Xie, Yuxin Fang, Tae Igarashi-Yokoi, Muka Moriyama, Satoko Ogata, Tatsuhiko Tsunoda, Takashi Kamatani, Shinji Yamamoto, Ching-Yu Cheng, Seang-Mei Saw, Daniel Ting, Tien Y Wong, Kyoko Ohno-Matsui. Deep Learning Approach for Automated Detection of Myopic Maculopathy and Pathologic Myopia in Fundus Images. Ophthalmol Retina. 2021.02; ( PubMed, DOI )

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Books etc 【 display / non-display

  • Tatsuhiko Tsunoda, Toshihiro Tanaka, Yusuke Nakamura (Eds.). Genome-Wide Association Studies. Springer Nature, 2019.11 (ISBN : 978-9811381768)

  • Vans E., Sharma A., Patil A., Shigemizu D., Tsunoda T. Subject-Specific-Frequency-Band for Motor Imagery EEG Signal Recognition Based on Common Spatial Spectral Pattern. In: Nayak A., Sharma A. (eds) PRICAI 2019: Trends in Artificial Intelligence. PRICAI 2019. Lecture Notes in Computer Science. Springer, 2019.08

  • Singh V, Sharma A, Chandra A, Dehzangi A, Shigemizu D, Tsunoda T. Computational Prediction of Lysine Pupylation Sites in Prokaryotic Proteins Using Position Specific Scoring Matrix into Bigram for Feature Extraction. In: Nayak A., Sharma A. (eds) PRICAI 2019: Trends in Artificial Intelligence. PRICAI 2019. Lecture Notes in Computer Science. Springer, 2019.08 (ISBN : 978-3-030-29893-7)

  • Vans E., Sharma A., Patil A., Shigemizu D., Tsunoda T. Clustering of Small-Sample Single-Cell RNA-Seq Data via Feature Clustering and Selection. In: Nayak A., Sharma A. (eds) PRICAI 2019: Trends in Artificial Intelligence. PRICAI 2019. Lecture Notes in Computer Science. Springer, 2019.08

  • Kenichi Matsubara, Yoshiyuki Sakaki (Sup.). (Tatsuhiko Tsunoda etc. in part). Genomic Function - Expression Profile and Transcriptome. 2000.09 (ISBN : 978-4521610214)

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Conference Activities & Talks 【 display / non-display

  • Tatsuhiko Tsunoda. Genomic Medical Science through New Knowledge. The University of Tokyo Genomic Medical Science Research Organization 2020 Symposium 2021.03.25

  • Tatsuhiko Tsunoda. Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine. ERCIM-JST Joint Symposium on Big Data and Artificial Intelligence 2021.02.18

  • Tatsuhiko Tsunoda. Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine. CREST International Symposium on Big Data Application 2021.01.23

  • Tatsuhiko Tsunoda. Deep learning opens up new frontiers in genomic medicine. The 16th TR Workshop of the Japanese Association for Molecular Target Therapy of Cancer 2021.01.19

  • Tatsuhiko Tsunoda. Personalized Cancer Medicine with Heterogeneity and Immunological Analysis. CREST International Symposium on Big Data Application 2020.01.13 Tokyo

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Works 【 display / non-display

  • DeepInsight: Package of DeepInsight methodology,Software,2019.08

  • IMSIndel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.,Software,2018.04

  • DRAGON: Matlab package of DRAGON clustering approach,Software,2017.09

  • 2D-EM: Matlab package of 2D-EM clustering approach,Software,2017.08

  • Arete - an analysis toolkit for network-based gene prioritisation,Software,2017.04

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Awards & Honors 【 display / non-display

  • Dream Challenges Certificate of Best Performance - Disease Module Identification DREAM Challenge Sub-Challenge 2,DREAM Challenge,2016.11

Others 【 display / non-display

  • Alzheimer disease associated genes were identified by RIKEN-TMDU,2018.08

    Appeared in newspaper Kagaku-Kougyou-Nippou

  • New Alzheimer disease causing genes were identified with an integrative analysis method,2018.08

    Appeared in newspaper YAKUJINIPPO

  • RIKEN et al identified new Alzheimer disease associated genes,2018.08

    Appeared in newspaper Nikkan Kougyou Shimbun

  • Two new Alzheimer disease causing genes were identified,2018.08

    Appeared in newspaper Medical News QLifePro

  • Alzheimer disease associated genes were identified,2018.08

    Appeared in newspaper NIKKEI-biotech

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