Published Papers & Misc - SHIBA Takahiko
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Latimer JM, Maekawa S, Shiba T, Fretwurst T, Chen M, Larsson L, Sugai JV, Kostenuik P, Mitlak B, Lanske B, Giannobile WV. Healing sequelae following tooth extraction and dental implant placement in an aged, ovariectomy model JBMR Plus. 2024.08;
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NAGAI Takahiko , SHIBA Takahiko , KOMATSU Keiji , MATSUMURA Shunsuke , KOYANAGI Tatsuro , NEMOTO Takashi , KOBAYASHI Ryota , TAKEUCHI Yasuo , IWATA Takanori. Characterizing Bacterial Communities among Healthy, Peri—implant Mucositis, and Peri—implantitis Statuses by 16S rRNA Gene Amplicon Sequencing The Journal of the Stomatological Society. 2024.03; 91 (1):
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Watanabe K, Tanaka E, Kamoi K, Tichy A, Shiba T, Yonerakura K, Nakajima M, Han R, Hosaka K. A dual composite resin injection molding technique with 3D-printed flexible indices for biomimetic replacement of a missing mandibular lateral incisor. J Prosthodont Res. 2024.03; ( PubMed, DOI )
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Takahiko Nagai, Takahiko Shiba, Keiji Komatsu, Shunsuke Matsumura, Tatsuro Koyanagi, Takashi Nemoto, Ryota Kobayashi, Yasuo Takeuchi, Takanori Iwata. Characterizing Bacterial Communities among Healthy, Peri-implant Mucositis, and Peri-implantitis Statuses by 16S rRNA gene amplicon sequencing 口腔病学会雑誌. 2024.03; 91 (1):
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Yokose M, Komatsu K, Shiba T, Tanaka D, Takeuchi Y, Ikeda Y. Gnetin-C, a Resveratrol Dimer, Inhibits the Growth and Virulence of Porphyromonas gingivalis 口腔病学会雑誌. 2024.03; 91 (1): 47-65. ( ichushi )
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Ishikawa H, Valdes L, Xie J, Ohyama H, Tate I, Maeno M, Shiba T, Nagai S. Learning from Mistakes—Dental Students’ Learning Experiences from Adverse Clinical Events Educ. Sci.. 2024.02;
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Shiba T, Komatsu K, Takeuchi Y, Koyanagi T, Taniguchi Y, Takagi T, Maekawa S, Nagai T, Kobayashi R, Matsumura S, Katagiri S, Izumi Y, Aoki A, Iwata T. Novel flowchart guiding the non-surgical and surgical management of peri-implant complications: a narrative review Bioenginnering. 2024.01; 11 (2): 118.
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Lin P, Liu A, Tsuchiya Y, Noritake K, Ohsugi Y, Toyoshima K, Tsukahara Y, Shiba T, Nitta H, Aoki A, Iwata T, Katagiri S. Association between periodontal disease and chronic obstructive pulmonary disease Japanese Dental Science Review. 2023.12; 59 389-402. ( PubMed, DOI )
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Keita Toyoshima, Yujin Ohsugi, Peiya Lin, Keiji Komatsu, Takahiko Shiba, Yasuo Takeuchi, Tomomitsu Hirota, Tsuyoshi Shimohira, Yosuke Tsuchiya, Sayaka Katagiri, Takanori Iwata, Akira Aoki. Blue Light-Emitting Diode Irradiation Without a Photosensitizer Alters Oral Microbiome Composition of Ligature-Induced Periodontitis in Mice. Photobiomodul Photomed Laser Surg. 2023.10; 41 (10): 549-559. ( PubMed, DOI )
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Katagiri S, Ohsugi Y, Shiba T, Yoshimi K, Nakagawa K, Nagasawa Y, Uchida A, Liu A, Lin P, Tsukahara Y, Iwata T, Tohara H. Homemade blenderized tube feeding improves gut microbiome communities in children with enteral nutrition Frontiers in Microbiology. 2023.08; 14 1215236.
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Shiba T, Komatsu K, Watanabe T, Takeuchi Y, Nemoto T, Ohsugi Y, Katagiri S, Shimogishi M, Marukawa E, Iwata T. Peri-implantitis management by resective surgery combined with implantoplasty and Er:YAG laser irradiation, accompanied by free gingival graft: a case report. Therapeutic advances in chronic disease. 2023.06; 14 20406223231174816. ( PubMed, DOI )
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Kataoka A, Shiba T, Katagiri S, Koyama S, Kito K, Ota T, Katayama T, Ohsugi Y, Nagai T, Kobayashi R, Komatsu K, Urata M, Imazuru T, Iwata T, Kozuma K. Novel and Efficient Method for Diagnosing Infective Endocarditis Using 16S Ribosomal RNA Gene Amplicon Sequence JACC Case Reports. 2023.04; 11 101793. ( PubMed, DOI )
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Nagasawa Y, Katagiri S, Nakagawa K, Hirota T, Yoshimi K, Uchida A, Hatasa M, Komatsu K, Shiba T, Ohsugi Y, Uesaka N, Iwata T, Tohara H. Xanthan gum-based fluid thickener decreases postprandial blood glucose associated with increase of Glp1 and Glp1r expression in ileum and alteration of gut microbiome Journal of Functional Foods. 2022.11;
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Ohsugi Y, Hatasa M, Katagiri S, Hirota T, Shimohira T, Shiba T, Komatsu K, Tsuchiya Y, Fukuba S, Lin P, Toyoshima K, Maekawa S, Niimi H, Iwata T, Aoki A. High-frequency pulsed diode laser irradiation inhibits bone resorption in mice with ligature-induced periodontitis Journal of Clinical Periodontology. 2022.07; e-pub (12): 1275-1288. ( PubMed, DOI )
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Shiba T, Katagiri S, Komatsu K, Nemoto T, Takeuchi Y, Chen B, Zhou YS, Iwata T. Treatment of peri-implantitis caused by malpositioning and an extra implant: a case report Int J Periodontics Restorative Dent. 2022.01; 42 (1): e15-e20. ( PubMed, DOI )
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Yoshida S, Hatasa M, Ohsugi Y, Tsuchiya Y, Liu A, Niimi H, Morita K, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Okano T, Hirose A, Ibi R, Noritake K, Tomiga Y, Nitta H, Suzuki T, Takahashi H, Miyasaka N, Iwata T, Katagiri S. Porphyromonas gingivalis administration induces gestational obesity, alters gene expression in the liver and brown adipose tissue in pregnant mice, and causes underweight in fetuses Frontiers in Cellular and Infection Microbiology. 2022.01; 11 745117. ( PubMed, DOI )
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Shimogishi M, Watanabe T, Shibasaki M, Shiba T, Komatsu K, Nemoto T, Ishihara K, Nakano Y, Iwata T, Kasugai S, Nakagawa I. Patient-specific establishment of bacterial composition within the peri-implant microbiota during the earliest weeks after implant uncovering. Journal of Periodontal Research. 2021.10; 56 (5): 964-971. ( PubMed, DOI )
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Nemoto T, Shiba T, Komatsu K, Watanabe T, Shimogishi M, Shibasaki M, Koyanagi T, Nagai T, Katagiri S, Takeuchi Y, Iwata T. Discrimination of bacterial community structures among healthy, gingivitis, and periodontitis statuses through integrated metatranscriptomic and network analyses. mSystems. 2021.10; 6 (6): e0088621. ( PubMed, DOI )
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Saida H, Fukuba S, Shiba T, Komatsu K, Iwata T, Nitta H. Two-stage approach for class II mandibular furcation defect with insufficient keratinized mucosa: a case report with 3 years' follow-up. The Journal of international medical research. 2021.09; 49 (9): 3000605211044595. ( PubMed, DOI )
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Lin P, Niimi H, Ohsugi Y, Tsuchiya Y, Shimohira T, Komatsu K, Liu A, Shiba T, Aoki A, Iwata T, Katagiri S. Application of Ligature-Induced Periodontitis in Mice to Explore the Molecular Mechanism of Periodontal Disease International Journal of Molecular Sciences. 2021.08; 22 (16): 8900. ( PubMed, DOI )
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Shimohira T, Niimi H, Ohsugi Y, Tsuchiya Y, Morita K, Yoshida S, Hatasa M, Shiba T, Kadokura H, Yokose S, Katagiri S, Iwata T, Aoki A. Low-Level Erbium-Doped Yttrium Aluminum Garnet Laser Irradiation Induced Alteration of Gene Expression in Osteogenic Cells from Rat Calvariae Photobiomodulation, Photobiomedicine, and Laser Surgery. 2021.07; ( DOI )
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Shiba T, Watanabe T, Komatsu K, Koyanagi T, Nemoto T, Ohsugi Y, Michi Y, Katagiri S, Takeuchi Y, Ishihara K, Iwata T. Non-surgical treatment for periodontitis and peri-implantitis: longitudinal clinical and bacteriological findings-A case report with a 7-year follow-up evaluation. SAGE open medical case reports. 2021.07; 9 2050313X211029154. ( PubMed, DOI )
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Yang J, Liu Q, Shiba T, Ji C, Iwata T, Jiang T. Application of digital prosthodontics and connective tissue grafting in the management of peri-implant mucosal recession around a malpositioned 1-piece implant: A clinical report. The Journal of prosthetic dentistry. 2021.05; 128 (6): 1145-1151. ( PubMed, DOI )
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Kataoka A, Katagiri S, Kawashima H, Nagura F, Nara Y, Hioki H, Nakashima M, Sasaki N, Hatasa M, Maekawa S, Ohsugi Y, Shiba T, Watanabe Y, Shimokawa T, Iwata T, Kozuma K. Association between Periodontal Bacteria and Degenerative Aortic Stenosis: A Pilot Study Journal of Periodontal and Implant Science. 2021.04; 51 (e9): 1-24.
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Hatasa M, Ohsugi Y, Katagiri S, Yoshida S, Niimi H, Morita K, Tsuchiya Y, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Tohara H, Takahashi H, Nitta H, Iwata T. Endotoxemia by Porphyromonas gingivalis alters endocrine functions in brown adipose tissue Frontiers in Cellular and Infection Microbiology. 2021.01; 19 (10): 580577.
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Komatsu K, Shiba T, Takeuchi Y, Watanabe T, Koyanagi T, Nemoto T, Shimogishi M, Shibasaki M, Katagiri S, Kasugai S, Iwata T. Discriminating Microbial Community Structure Between Peri-Implantitis and Periodontitis With Integrated Metagenomic, Metatranscriptomic, and Network Analysis Frontiers in Cellular and Infection Microbiology. 2020.12; 10 ( DOI )
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Watanabe K, Katagiri S, Takahashi H, Sasaki N, Maekawa S, Komazaki R, Hatasa M, Kitajima Y, Maruyama Y, Shiba T, Komatsu K, Ohsugi Y, Tanaka K, Matsuzawa A, Hirota T, Tohara H, Eguchi Y, Anzai K, Hattori A, Iwata T. Porphyromonas gingivalis impairs glucose uptake in skeletal muscle associated with altering gut microbiota The FASEB Journal. 2020.11; 35 (2): e21171. ( PubMed, DOI )
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Ikeda Eri, Shiba Takahiko, Ikeda Yuichi, Suda Wataru, Nakasato Akinori, Takeuchi Yasuo, Azuma Miyuki, Hattori Masahira, Izumi Yuichi. Japanese subgingival microbiota in health vs disease and their roles in predicted functions associated with periodontitis ODONTOLOGY. 2020.04; 108 (2): 280-291. ( PubMed, DOI )
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Ikeda Eri, Shiba Takahiko, Ikeda Yuichi, Suda Wataru, Nakasato Akinori, Takeuchi Yasuo, Azuma Miyuki, Hattori Masahira, Izumi Yuichi. 日本人の健康および病的状態にある歯肉縁下での微生物叢の比較ならびにその微生物叢が歯周炎に関連すると予測される機能において有する役割(Japanese subgingival microbiota in health vs disease and their roles in predicted functions associated with periodontitis) Odontology. 2020.04; 108 (2): 280-291. ( ichushi )
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Ogawa M, Katagiri S, Koyanagi T, Maekawa S, Shiba T, Ohsugi Y, Takeuchi Y, Ikawa T, Takeuchi S, Sekiuchi T, Arai Y, Kazama R, Wakabayashi N, Izumi Y, Iwata T. Accuracy of cone beam computed tomography in evaluation of palatal mucosa thickness. Journal of Clinical Periodontology. 2020.01; ( PubMed, DOI )
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Shiba T, Watanabe T. Polymicrobial Peri-Implant Infection Risk Factor for Peri-implant Diseases. 2020;
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Hatasa M, Ohsugi Y, Katagiri S, Yoshida S, Niimi H, Morita K, Tsuchiya Y, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Tohara H, Takahashi H, Nitta H, Iwata T.. Endotoxemia by Porphyromonas gingivalis alters endocrine functions in brown adipose tissue Frontiers in Cellular and Infection Microbiology. 2020; 10 580577. ( PubMed, DOI )
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Katagiri S, Shiba T, Tohara H, Yamaguchi K, Hara K, Nakagawa K, Komatsu K, Watanabe K, Ohsugi Y, Maekawa S, Iwata T. Re-initiation of Oral Food Intake Following Enteral Nutrition Alters Oral and Gut Microbiota Communities Frontiers in Cellular and Infection Microbiology. 2019.12; 9 434. ( PubMed, DOI )
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Watanabe K, Ohsugi Y, Maekawa S, Sasaki N, Shiba T, Katagiri S, Arakawa S. Ozone Ultrafine Bubble Water improves wound healing via modification of inflammation Journal of the Stomatological Societ. 2019.07; 86 (2): 25-34.
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渡辺 数基, 大杉 勇人, 前川 祥吾, 佐々木 直樹, 芝 多佳彦, 片桐 さやか, 荒川 真一. 創傷治癒モデルマウスにおける炎症因子を介したオゾンウルトラファインバブル水の効果(Ozone Ultrafine Bubble Water Improves Wound Healing via Modification of Inflammation) 口腔病学会雑誌. 2019.07; 86 (2): 25-35. ( ichushi )
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Ohtsu Anri, Takeuchi Yasuo, Katagiri Sayaka, Suda Wataru, Maekawa Shogo, Shiba Takahiko, Komazaki Rina, Udagawa Sayuri, Sasaki Naoki, Hattori Masahira, Izumi Yuichi. Influence of Porphyromonas gingivalis in gut microbiota of streptozotocin-induced diabetic mice ORAL DISEASES. 2019.04; 25 (3): 868-880. ( PubMed, DOI )
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Funahashi Kenta, Shiba Takahiko, Watanabe Takayasu, Muramoto Keiko, Takeuchi Yasuo, Ogawa Takuya, Izumi Yuichi, Sekizaki Tsutomu, Nakagawa Ichiro, Moriyama Keiji. Functional dysbiosis within dental plaque microbiota in cleft lip and palate patients PROGRESS IN ORTHODONTICS. 2019.03; 20 (1): 11. ( PubMed, DOI )
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Ikeda E, Shiba T, Ikeda Y, Suda W, Nakasato A, Takeuchi Y, Azuma M, Hattori M, Izumi Y. Deep sequencing reveals specific bacterial signatures in the subgingival microbiota of healthy subjects. Clinical oral investigations. 2019.01; e-pub ( PubMed, DOI )
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Sasaki Naoki, Katagiri Sayaka, Komazaki Rina, Watanabe Kazuki, Maekawa Shogo, Shiba Takahiko, Udagawa Sayuri, Takeuchi Yasuo, Ohtsu Ann, Kohda Takashi, Tohara Haruka, Miyasaka Naoyuki, Hirota Tomomitsu, Tamari Mayumi, Izumi Yuichi. Endotoxemia by Porphyromonas gingivalis Injection Aggravates Non-alcoholic Fatty Liver Disease, Disrupts Glucose/Lipid Metabolism, and Alters Gut Microbiota in Mice FRONTIERS IN MICROBIOLOGY. 2018.10; 9 2470. ( PubMed, DOI )
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Komazaki R, Katagiri S, Takahashi H, Maekawa S, Shiba T, Takeuchi Y, Kitajima Y, Ohtsu A, Udagawa S, Sasaki N, Watanabe K, Sato N, Miyasaka N, Eguchi Y, Anzai K, Izumi Y. Author Correction: Periodontal pathogenic bacteria, Aggregatibacter actinomycetemcomitans affect non-alcoholic fatty liver disease by altering gut microbiota and glucose metabolism. Scientific reports. 2018.03; 8 (1): 4620. ( PubMed, DOI )
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Udagawa S, Katagiri S, Maekawa S, Takeuchi Y, Komazaki R, Ohtsu A, Sasaki N, Shiba T, Watanabe K, Ishihara K, Sato N, Miyasaka N, Izumi Y. Effect of Porphyromonas gingivalis infection in the placenta and umbilical cord in pregnant mice with low birth weight. Acta Odontologica Scandinavica. 2018.01; 1-9. ( PubMed, DOI )
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Rina Komazaki, Sayaka Katagiri, Hirokazu Takahashi, Shogo Maekawa, Takahiko Shiba, Yasuo Takeuchi, Yoichiro Kitajima, Anri Ohtsu, Sayuri Udagawa, Naoki Sasaki, Kazuki Watanabe, Noriko Sato, Naoyuki Miyasaka, Yuichiro Eguchi, Keizo Anzai, Yuichi Izumi. Periodontal pathogenic bacteria, Aggregatibacter actinomycetemcomitans affect non-alcoholic fatty liver disease by altering gut microbiota and glucose metabolism Scientific Reports. 2017.10;
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Kachi H, Maruyama N, Maruyama F, Shiba T, Watanabe T, Goda A, Murase K, Michi Y, Takeuchi Y, Izumi Y, Harada K, Nakagawa I. Active microbiota show specific correlationships in peri-implantitis and periodontitis. 口腔病学会雑誌. 2017.03; 84 (1): 25-36.
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加地 博一, 丸山 緑子, 丸山 史人, 芝 多佳彦, 渡辺 孝康, 郷田 瑛, 村瀬 一典, 道 泰之, 竹内 康雄, 和泉 雄一, 山口 聰, 中川 一路. 細菌活動性から顕在化するインプラント周囲炎および歯周炎の疾患特異的な細菌群集内の共起構造(Active Microbiota Show Specific Correlationships in Peri-implantitis and Periodontitis) 口腔病学会雑誌. 2017.03; 84 (1): 25-36. ( ichushi )
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Shiba T, Watanabe T, Kachi H, Koyanagi T, Maruyama N, Murase K, Takeuchi Y, Maruyama F, Izumi Y, Nakagawa I. Distinct interacting core taxa in co-occurrence networks enable discrimination of polymicrobial oral diseases with similar symptoms. Sci Rep. 2016.08; 6 30997. ( PubMed, DOI )