Shiba T, Komatsu K, Takeuchi Y, Koyanagi T, Taniguchi Y, Takagi T, Maekawa S, Nagai T, Kobayashi R, Matsumura S, Katagiri S, Izumi Y, Aoki A, Iwata T. Novel flowchart guiding the non-surgical and surgical management of peri-implant complications: a narrative review Bioenginnering. 2024.01; 11 (2): 118.

Lin P, Liu A, Tsuchiya Y, Noritake K, Ohsugi Y, Toyoshima K, Tsukahara Y, Shiba T, Nitta H, Aoki A, Iwata T, Katagiri S. Association between periodontal disease and chronic obstructive pulmonary disease Japanese Dental Science Review. 2023.12; 59 389-402. ( PubMed, DOI )

Keita Toyoshima, Yujin Ohsugi, Peiya Lin, Keiji Komatsu, Takahiko Shiba, Yasuo Takeuchi, Tomomitsu Hirota, Tsuyoshi Shimohira, Yosuke Tsuchiya, Sayaka Katagiri, Takanori Iwata, Akira Aoki. Blue Light-Emitting Diode Irradiation Without a Photosensitizer Alters Oral Microbiome Composition of Ligature-Induced Periodontitis in Mice. Photobiomodul Photomed Laser Surg. 2023.10; 41 (10): 549-559. ( PubMed, DOI )

Katagiri S, Ohsugi Y, Shiba T, Yoshimi K, Nakagawa K, Nagasawa Y, Uchida A, Liu A, Lin P, Tsukahara Y, Iwata T, Tohara H. Homemade blenderized tube feeding improves gut microbiome communities in children with enteral nutrition Frontiers in Microbiology. 2023.08; 14 1215236.

Shiba T, Komatsu K, Watanabe T, Takeuchi Y, Nemoto T, Ohsugi Y, Katagiri S, Shimogishi M, Marukawa E, Iwata T. Peri-implantitis management by resective surgery combined with implantoplasty and Er:YAG laser irradiation, accompanied by free gingival graft: a case report. Therapeutic advances in chronic disease. 2023.06; 14 20406223231174816. ( PubMed, DOI )

Kataoka A, Shiba T, Katagiri S, Koyama S, Kito K, Ota T, Katayama T, Ohsugi Y, Nagai T, Kobayashi R, Komatsu K, Urata M, Imazuru T, Iwata T, Kozuma K. Novel and Efficient Method for Diagnosing Infective Endocarditis Using 16S Ribosomal RNA Gene Amplicon Sequence JACC Case Reports. 2023.04; 11 101793. ( PubMed, DOI )

Nagasawa Y, Katagiri S, Nakagawa K, Hirota T, Yoshimi K, Uchida A, Hatasa M, Komatsu K, Shiba T, Ohsugi Y, Uesaka N, Iwata T, Tohara H. Xanthan gum-based fluid thickener decreases postprandial blood glucose associated with increase of Glp1 and Glp1r expression in ileum and alteration of gut microbiome Journal of Functional Foods. 2022.11;

Ohsugi Y, Hatasa M, Katagiri S, Hirota T, Shimohira T, Shiba T, Komatsu K, Tsuchiya Y, Fukuba S, Lin P, Toyoshima K, Maekawa S, Niimi H, Iwata T, Aoki A. High-frequency pulsed diode laser irradiation inhibits bone resorption in mice with ligature-induced periodontitis Journal of Clinical Periodontology. 2022.07; e-pub (12): 1275-1288. ( PubMed, DOI )

Shiba T, Katagiri S, Komatsu K, Nemoto T, Takeuchi Y, Chen B, Zhou YS, Iwata T. Treatment of peri-implantitis caused by malpositioning and an extra implant: a case report Int J Periodontics Restorative Dent. 2022.01; 42 (1): e15-e20. ( PubMed, DOI )

Yoshida S, Hatasa M, Ohsugi Y, Tsuchiya Y, Liu A, Niimi H, Morita K, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Okano T, Hirose A, Ibi R, Noritake K, Tomiga Y, Nitta H, Suzuki T, Takahashi H, Miyasaka N, Iwata T, Katagiri S. Porphyromonas gingivalis administration induces gestational obesity, alters gene expression in the liver and brown adipose tissue in pregnant mice, and causes underweight in fetuses Frontiers in Cellular and Infection Microbiology. 2022.01; 11 745117. ( PubMed, DOI )

Shimogishi M, Watanabe T, Shibasaki M, Shiba T, Komatsu K, Nemoto T, Ishihara K, Nakano Y, Iwata T, Kasugai S, Nakagawa I. Patient-specific establishment of bacterial composition within the peri-implant microbiota during the earliest weeks after implant uncovering. Journal of Periodontal Research. 2021.10; 56 (5): 964-971. ( PubMed, DOI )

Nemoto T, Shiba T, Komatsu K, Watanabe T, Shimogishi M, Shibasaki M, Koyanagi T, Nagai T, Katagiri S, Takeuchi Y, Iwata T. Discrimination of bacterial community structures among healthy, gingivitis, and periodontitis statuses through integrated metatranscriptomic and network analyses. mSystems. 2021.10; 6 (6): e0088621. ( PubMed, DOI )

Saida H, Fukuba S, Shiba T, Komatsu K, Iwata T, Nitta H. Two-stage approach for class II mandibular furcation defect with insufficient keratinized mucosa: a case report with 3 years' follow-up. The Journal of international medical research. 2021.09; 49 (9): 3000605211044595. ( PubMed, DOI )

Lin P, Niimi H, Ohsugi Y, Tsuchiya Y, Shimohira T, Komatsu K, Liu A, Shiba T, Aoki A, Iwata T, Katagiri S. Application of Ligature-Induced Periodontitis in Mice to Explore the Molecular Mechanism of Periodontal Disease International Journal of Molecular Sciences. 2021.08; 22 (16): 8900. ( PubMed, DOI )

Shimohira T, Niimi H, Ohsugi Y, Tsuchiya Y, Morita K, Yoshida S, Hatasa M, Shiba T, Kadokura H, Yokose S, Katagiri S, Iwata T, Aoki A. Low-Level Erbium-Doped Yttrium Aluminum Garnet Laser Irradiation Induced Alteration of Gene Expression in Osteogenic Cells from Rat Calvariae Photobiomodulation, Photobiomedicine, and Laser Surgery. 2021.07; ( DOI )

Shiba T, Watanabe T, Komatsu K, Koyanagi T, Nemoto T, Ohsugi Y, Michi Y, Katagiri S, Takeuchi Y, Ishihara K, Iwata T. Non-surgical treatment for periodontitis and peri-implantitis: longitudinal clinical and bacteriological findings-A case report with a 7-year follow-up evaluation. SAGE open medical case reports. 2021.07; 9 2050313X211029154. ( PubMed, DOI )

Yang J, Liu Q, Shiba T, Ji C, Iwata T, Jiang T. Application of digital prosthodontics and connective tissue grafting in the management of peri-implant mucosal recession around a malpositioned 1-piece implant: A clinical report. The Journal of prosthetic dentistry. 2021.05; 128 (6): 1145-1151. ( PubMed, DOI )

Kataoka A, Katagiri S, Kawashima H, Nagura F, Nara Y, Hioki H, Nakashima M, Sasaki N, Hatasa M, Maekawa S, Ohsugi Y, Shiba T, Watanabe Y, Shimokawa T, Iwata T, Kozuma K. Association between Periodontal Bacteria and Degenerative Aortic Stenosis: A Pilot Study Journal of Periodontal and Implant Science. 2021.04; 51 (e9): 1-24.

Hatasa M, Ohsugi Y, Katagiri S, Yoshida S, Niimi H, Morita K, Tsuchiya Y, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Tohara H, Takahashi H, Nitta H, Iwata T. Endotoxemia by Porphyromonas gingivalis alters endocrine functions in brown adipose tissue Frontiers in Cellular and Infection Microbiology. 2021.01; 19 (10): 580577.

Komatsu K, Shiba T, Takeuchi Y, Watanabe T, Koyanagi T, Nemoto T, Shimogishi M, Shibasaki M, Katagiri S, Kasugai S, Iwata T. Discriminating Microbial Community Structure Between Peri-Implantitis and Periodontitis With Integrated Metagenomic, Metatranscriptomic, and Network Analysis Frontiers in Cellular and Infection Microbiology. 2020.12; 10 ( DOI )

Watanabe K, Katagiri S, Takahashi H, Sasaki N, Maekawa S, Komazaki R, Hatasa M, Kitajima Y, Maruyama Y, Shiba T, Komatsu K, Ohsugi Y, Tanaka K, Matsuzawa A, Hirota T, Tohara H, Eguchi Y, Anzai K, Hattori A, Iwata T. Porphyromonas gingivalis impairs glucose uptake in skeletal muscle associated with altering gut microbiota The FASEB Journal. 2020.11; 35 (2): e21171. ( PubMed, DOI )

Ikeda Eri, Shiba Takahiko, Ikeda Yuichi, Suda Wataru, Nakasato Akinori, Takeuchi Yasuo, Azuma Miyuki, Hattori Masahira, Izumi Yuichi. Japanese subgingival microbiota in health vs disease and their roles in predicted functions associated with periodontitis ODONTOLOGY. 2020.04; 108 (2): 280-291. ( PubMed, DOI )

Ikeda Eri, Shiba Takahiko, Ikeda Yuichi, Suda Wataru, Nakasato Akinori, Takeuchi Yasuo, Azuma Miyuki, Hattori Masahira, Izumi Yuichi. 日本人の健康および病的状態にある歯肉縁下での微生物叢の比較ならびにその微生物叢が歯周炎に関連すると予測される機能において有する役割(Japanese subgingival microbiota in health vs disease and their roles in predicted functions associated with periodontitis) Odontology. 2020.04; 108 (2): 280-291. ( ichushi )

Ogawa M, Katagiri S, Koyanagi T, Maekawa S, Shiba T, Ohsugi Y, Takeuchi Y, Ikawa T, Takeuchi S, Sekiuchi T, Arai Y, Kazama R, Wakabayashi N, Izumi Y, Iwata T. Accuracy of cone beam computed tomography in evaluation of palatal mucosa thickness. Journal of Clinical Periodontology. 2020.01; ( PubMed, DOI )

Shiba T, Watanabe T. Polymicrobial Peri-Implant Infection Risk Factor for Peri-implant Diseases. 2020;

Hatasa M, Ohsugi Y, Katagiri S, Yoshida S, Niimi H, Morita K, Tsuchiya Y, Shimohira T, Sasaki N, Maekawa S, Shiba T, Hirota T, Tohara H, Takahashi H, Nitta H, Iwata T.. Endotoxemia by Porphyromonas gingivalis alters endocrine functions in brown adipose tissue Frontiers in Cellular and Infection Microbiology. 2020; 10 580577. ( PubMed, DOI )

Katagiri S, Shiba T, Tohara H, Yamaguchi K, Hara K, Nakagawa K, Komatsu K, Watanabe K, Ohsugi Y, Maekawa S, Iwata T. Re-initiation of Oral Food Intake Following Enteral Nutrition Alters Oral and Gut Microbiota Communities Frontiers in Cellular and Infection Microbiology. 2019.12; 9 434. ( PubMed, DOI )

Watanabe K, Ohsugi Y, Maekawa S, Sasaki N, Shiba T, Katagiri S, Arakawa S. Ozone Ultrafine Bubble Water improves wound healing via modification of inflammation Journal of the Stomatological Societ. 2019.07; 86 (2): 25-34.

渡辺 数基, 大杉 勇人, 前川 祥吾, 佐々木 直樹, 芝 多佳彦, 片桐 さやか, 荒川 真一. 創傷治癒モデルマウスにおける炎症因子を介したオゾンウルトラファインバブル水の効果(Ozone Ultrafine Bubble Water Improves Wound Healing via Modification of Inflammation) 口腔病学会雑誌. 2019.07; 86 (2): 25-35. ( ichushi )

Ohtsu Anri, Takeuchi Yasuo, Katagiri Sayaka, Suda Wataru, Maekawa Shogo, Shiba Takahiko, Komazaki Rina, Udagawa Sayuri, Sasaki Naoki, Hattori Masahira, Izumi Yuichi. Influence of Porphyromonas gingivalis in gut microbiota of streptozotocin-induced diabetic mice ORAL DISEASES. 2019.04; 25 (3): 868-880. ( PubMed, DOI )

Funahashi Kenta, Shiba Takahiko, Watanabe Takayasu, Muramoto Keiko, Takeuchi Yasuo, Ogawa Takuya, Izumi Yuichi, Sekizaki Tsutomu, Nakagawa Ichiro, Moriyama Keiji. Functional dysbiosis within dental plaque microbiota in cleft lip and palate patients PROGRESS IN ORTHODONTICS. 2019.03; 20 (1): 11. ( PubMed, DOI )

Ikeda E, Shiba T, Ikeda Y, Suda W, Nakasato A, Takeuchi Y, Azuma M, Hattori M, Izumi Y. Deep sequencing reveals specific bacterial signatures in the subgingival microbiota of healthy subjects. Clinical oral investigations. 2019.01; e-pub ( PubMed, DOI )

Sasaki Naoki, Katagiri Sayaka, Komazaki Rina, Watanabe Kazuki, Maekawa Shogo, Shiba Takahiko, Udagawa Sayuri, Takeuchi Yasuo, Ohtsu Ann, Kohda Takashi, Tohara Haruka, Miyasaka Naoyuki, Hirota Tomomitsu, Tamari Mayumi, Izumi Yuichi. Endotoxemia by Porphyromonas gingivalis Injection Aggravates Non-alcoholic Fatty Liver Disease, Disrupts Glucose/Lipid Metabolism, and Alters Gut Microbiota in Mice FRONTIERS IN MICROBIOLOGY. 2018.10; 9 2470. ( PubMed, DOI )

Komazaki R, Katagiri S, Takahashi H, Maekawa S, Shiba T, Takeuchi Y, Kitajima Y, Ohtsu A, Udagawa S, Sasaki N, Watanabe K, Sato N, Miyasaka N, Eguchi Y, Anzai K, Izumi Y. Author Correction: Periodontal pathogenic bacteria, Aggregatibacter actinomycetemcomitans affect non-alcoholic fatty liver disease by altering gut microbiota and glucose metabolism. Scientific reports. 2018.03; 8 (1): 4620. ( PubMed, DOI )

Udagawa S, Katagiri S, Maekawa S, Takeuchi Y, Komazaki R, Ohtsu A, Sasaki N, Shiba T, Watanabe K, Ishihara K, Sato N, Miyasaka N, Izumi Y. Effect of Porphyromonas gingivalis infection in the placenta and umbilical cord in pregnant mice with low birth weight. Acta Odontologica Scandinavica. 2018.01; 1-9. ( PubMed, DOI )

Rina Komazaki, Sayaka Katagiri, Hirokazu Takahashi, Shogo Maekawa, Takahiko Shiba, Yasuo Takeuchi, Yoichiro Kitajima, Anri Ohtsu, Sayuri Udagawa, Naoki Sasaki, Kazuki Watanabe, Noriko Sato, Naoyuki Miyasaka, Yuichiro Eguchi, Keizo Anzai, Yuichi Izumi. Periodontal pathogenic bacteria, Aggregatibacter actinomycetemcomitans affect non-alcoholic fatty liver disease by altering gut microbiota and glucose metabolism Scientific Reports. 2017.10;

Kachi H, Maruyama N, Maruyama F, Shiba T, Watanabe T, Goda A, Murase K, Michi Y, Takeuchi Y, Izumi Y, Harada K, Nakagawa I. Active microbiota show specific correlationships in peri-implantitis and periodontitis. 口腔病学会雑誌. 2017.03; 84 (1): 25-36.

加地 博一, 丸山 緑子, 丸山 史人, 芝 多佳彦, 渡辺 孝康, 郷田 瑛, 村瀬 一典, 道 泰之, 竹内 康雄, 和泉 雄一, 山口 聰, 中川 一路. 細菌活動性から顕在化するインプラント周囲炎および歯周炎の疾患特異的な細菌群集内の共起構造(Active Microbiota Show Specific Correlationships in Peri-implantitis and Periodontitis) 口腔病学会雑誌. 2017.03; 84 (1): 25-36. ( ichushi )

Shiba T, Watanabe T, Kachi H, Koyanagi T, Maruyama N, Murase K, Takeuchi Y, Maruyama F, Izumi Y, Nakagawa I. Distinct interacting core taxa in co-occurrence networks enable discrimination of polymicrobial oral diseases with similar symptoms. Sci Rep. 2016.08; 6 30997. ( PubMed, DOI )

Shimohira T, Niimi H, Ohsugi Y, Tsuchiya Y, Morita K, Yoshida S, Hatasa M, Shiba T, Kadokura H, Yokose S, Katagiri S, Iwata T, Aoki A. . Low-level Er:YAG laser irradiation induced alteration of gene expression in rat calvarial osteogenic cells. Dental Laser Virtual Scientific Conference 2021 2021.07.16

Katagiri Sayaka, Watanabe Kazuki, Maekawa Shogo, Hatasa Masahiro, Shiba Takahiko, Komatsu Keiji, Ohsugi Yujin, Tohara Haruka, Iwata Takanori. Porphyromonas gingivalisは腸内細菌叢を変化させ、それに伴って骨格筋でのグルコース取り込みを障害する(Porphyromonas gingivalis impairs glucose uptake in skeletal muscle associated with altering gut microbiota). 口腔病学会雑誌 2021.03.01

Katagiri Sayaka, Watanabe Kazuki, Maekawa Shogo, Hatasa Masahiro, Shiba Takahiko, Komatsu Keiji, Ohsugi Yujin, Tohara Haruka, Iwata Takanori. Porphyromonas gingivalisは腸内細菌叢を変化させ、それに伴って骨格筋でのグルコース取り込みを障害する(Porphyromonas gingivalis impairs glucose uptake in skeletal muscle associated with altering gut microbiota). 口腔病学会雑誌 2021.03.01

Komatsu Keiji, Shiba Takahiko, Watanabe Takayasu, Nemoto Takashi, Koyanagi Tatsuro, Takeuchi Yasuo, Iwata Takanori. 歯周炎およびインプラント周囲炎の非外科的治療法と細菌叢の分析　7年間の経過観察結果(Non-surgical treatment and microbiome of periodontitis and peri-implantitis: seven-year follow-up). 日本歯周病学会会誌 2020.12.01

Keiji Komatsu, Yasuo Takeuchi, Takahiko Shiba, Takayasu Watanabe, Masahiro Shimogishi, Masaki Shibasaki, Takashi Nemoto Tatsuro Koyanagi, Sayaka Katagiri, Takanori Iwata. Omics analysis defines differences in microbial community structure between peri-implantitis and periodontitis. 第68回国際歯科研究学会日本部会 総会・学術大会 2020.11.07 Virtual

Keiji Komatsu, Takahiko Shiba, Takayasu Watanabe, Takashi Nemoto, Tatsuro Koyanagi, Takanori Iwata. Non-surgical treatment and microbiome of periodontitis and peri-implantitis: seven-year. The 106th Annual Meeting of the American Academy of Periodontology in collaboration with the Japanese Society of Periodontology and Japanese Academy of Clinical Periodontology 2020.11.06 Virtual

2. Katagiri S, Shiba T, Tohara H, Yamaguchi K, Hara K, Nakagawa K, Komatsu K, Watanabe K, Ohsugi Y, Maekawa S, Iwata T. Re-initiation of oral food intake following enteral nutrian alters oral and gut microbiota communities.. 第83回口腔病学会学術大会 2019.12.07

Tournadre C, Gritsch K, Takagi T, Shiba T, Mizutani K , Aoki A, Grosgogeat B. Cleaning potential of five different methods for peri-implantitis treatment: an in-vitro study. EAO’s 28th annual scientific meeting 2019.09.26 Congress center of Lisbon, Portugal

Shiba T. Evaluation of core microbiome and clinical approach in peri-implantitis.. Dentiste Expo 2019.06.20

15. Sasaki N, Katagiri S, Maekawa S, Shiba T, Takeuchi Y, Ohtsu A, Izumi Y. Endotoxemia by Porphyromonas gingivalis injection aggravates non-alcoholic fatty liver disease, disrupts glucose/lipid metabolism, and alters gut microbiota in mice.. 第83回口腔病学術大会 2018.11.30

芝 多佳彦. インプラント周囲疾患を対象としたトランスオミックス解析. 第8回湯島若手塾 2018.11.19

Naoki Sasaki, Sayaka Katagiri, Rina Komazaki, Kazuki Watanabe, Shogo Maekawa, Takahiko Shiba, Yasuo Takeuchi, Anri Ohtsu, Yuichi Izumi . Endotoxemia by Porphyromonas gingivalis injection aggravates non-alcoholic fatty liver disease, disrupts glucose/lipid metabolism, and alters gut microbiota in mice. 日本歯科保存学会2018年秋季学術大会 2018.11.02 京都

Shiba T, Takagi T, Koyanagi T, et al.. The clinical application of the novel diagnosis and treatment flowchart for peri-implantitis: Part 1 clinical application to mild case. EuroPerio9 2018.06.20 Amsterdam, Holland.

Taniguchi Y, Tatsuro K, Izumi Y, et al.. The clinical application of the novel diagnosis and treatment flowchart for peri-implantitis: Part 3 clinical application on severe case. EuroPerio9 2018.06.20 Amsterdam, Holland.

Koyanagi T, Taniguchi Y, Izumi Y, et al.. The clinical application of a novel diagnosis and treatment flowchart for peri-implantitis: Part 2 - application to moderate cases . EuroPerio9 2018.06.20 Amsterdam, Holland.

24. Sasaki N, Katagiri S, Komazaki R, Watanabe K, Maekawa S, Shiba T, Udagawa S, Takeuchi Y, Ohtsu A, Kohda T, Tohara H, Miyasaka N, Hirota T, Tamari M, Izumi Y. Sonicated Porphyromonas gingvalis affect non-alcoholic fatty liver disease via glucose metabolism. 9th Conference of the European Federation of Periodontology. 2018.06.20

Katagiri S, Komazaki R, Takahashi H, Maekawa S, Shiba T, Takeuchi Y, Kitajima Y, Ohtsu A, Udagawa S, Sasaki N, Watanabe K, Sato N, Miyasaka N, Eguchi Y, Anzai K, Izumi Y. Aggregatibacter actinomycetemcomitans affect non-alcoholic fatty liver disease by altering gut microbiota and glucose metabolis.. The 103rd Annual Meeting of American Academy of Periodontology 2017.09.10 Boston, USA

Shiba T, Watanabe T, Koyanagi T, Maruyama N, Takeuchi Y, Maruyama F, Izumi Y, Nakagawa I. Functional keystone species enable discrimination of peri-implantitis and periodontitis. The 102nd Annual Meeting of the American Academy of Periodontology 2016.09.10 San Diego, USA

渡辺孝康, 芝　多佳彦, 加地博一, 竹内康雄, 丸山史人, 和泉雄一, 中川一路. インプラント周囲炎と歯周炎における細菌叢メタトランスクリプトーム解析. 第58回歯科基礎医学会学術大会 2016.08.25 札幌

Shiba T, Watanabe T, Maruyama F, Takeuchi Y, Koyanagi T, Maruyama N, Nakagawa I, Izumi Y. Inconsistency between abundance of 16S rRNA and mRNA in bacterial community of periodontitis and peri-implantitis. 8th Conference of the European Federation of Periodontology 2015.06.04 London, United Kingdom 2015.06.04

Shiba T, Takeuchi Y, Maruyama F, Maruyama N, Koyanagi T, Nakagawa I, Izumi Y. Selection of microbial species and functional gene causing Peri-implantitis of active microbial communities.. The 78th Annual Meeting of Stomatological Society 2013.12.07